Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
RNF135Q8IUD6 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.25■□□□□ 0.35
RNF135Q8IUD6 AC093004.1-201ENST00000508850 424 ntBASIC17.25■□□□□ 0.35
RNF135Q8IUD6 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF135Q8IUD6 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.25■□□□□ 0.35
RNF135Q8IUD6 MIR4538-201ENST00000581377 78 ntBASIC17.25■□□□□ 0.35
RNF135Q8IUD6 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF135Q8IUD6 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF135Q8IUD6 AC007431.3-201ENST00000623221 587 ntBASIC17.25■□□□□ 0.35
RNF135Q8IUD6 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF135Q8IUD6 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF135Q8IUD6 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF135Q8IUD6 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
RNF135Q8IUD6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF135Q8IUD6 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF135Q8IUD6 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RNF135Q8IUD6 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF135Q8IUD6 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RNF135Q8IUD6 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF135Q8IUD6 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF135Q8IUD6 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF135Q8IUD6 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.25■□□□□ 0.35
RNF135Q8IUD6 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RNF135Q8IUD6 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RNF135Q8IUD6 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.25■□□□□ 0.35
RNF135Q8IUD6 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF135Q8IUD6 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF135Q8IUD6 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 BTBD7P1-201ENST00000447253 1453 ntBASIC17.24■□□□□ 0.35
RNF135Q8IUD6 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 AL353705.2-201ENST00000428243 662 ntBASIC17.24■□□□□ 0.35
RNF135Q8IUD6 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 KRT223P-202ENST00000449164 1292 ntBASIC17.24■□□□□ 0.35
RNF135Q8IUD6 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 DOC2GP-202ENST00000514950 1163 ntBASIC17.24■□□□□ 0.35
RNF135Q8IUD6 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 AC133552.6-201ENST00000613406 534 ntBASIC17.24■□□□□ 0.35
RNF135Q8IUD6 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF135Q8IUD6 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RNF135Q8IUD6 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.23■□□□□ 0.35
RNF135Q8IUD6 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF135Q8IUD6 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RNF135Q8IUD6 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.23■□□□□ 0.35
RNF135Q8IUD6 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF135Q8IUD6 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF135Q8IUD6 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF135Q8IUD6 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
RNF135Q8IUD6 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
RNF135Q8IUD6 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF135Q8IUD6 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF135Q8IUD6 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF135Q8IUD6 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.23■□□□□ 0.35
RNF135Q8IUD6 HAUS4P1-201ENST00000406739 1145 ntBASIC17.23■□□□□ 0.35
RNF135Q8IUD6 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF135Q8IUD6 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF135Q8IUD6 AC234783.1-201ENST00000441761 496 ntBASIC17.23■□□□□ 0.35
RNF135Q8IUD6 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RNF135Q8IUD6 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF135Q8IUD6 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF135Q8IUD6 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF135Q8IUD6 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.23■□□□□ 0.35
RNF135Q8IUD6 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF135Q8IUD6 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.23■□□□□ 0.35
RNF135Q8IUD6 RN7SL828P-201ENST00000607615 303 ntBASIC17.23■□□□□ 0.35
RNF135Q8IUD6 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms