Protein–RNA interactions for Protein: Q0P6D6

CCDC15, Coiled-coil domain-containing protein 15, humanhuman

Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC15Q0P6D6 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC15Q0P6D6 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC15Q0P6D6 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC15Q0P6D6 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC15Q0P6D6 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC15Q0P6D6 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC15Q0P6D6 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC15Q0P6D6 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CCDC15Q0P6D6 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC15Q0P6D6 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC15Q0P6D6 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC15Q0P6D6 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC15Q0P6D6 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC15Q0P6D6 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC15Q0P6D6 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC15Q0P6D6 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 AC131009.4-201ENST00000624048 1740 ntBASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 AL355306.1-201ENST00000415580 579 ntBASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 METTL21AP1-201ENST00000438852 635 ntBASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 AP002490.2-201ENST00000524791 560 ntBASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 MPDU1-223ENST00000582151 728 ntBASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.9■□□□□ 0.3
CCDC15Q0P6D6 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC15Q0P6D6 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
CCDC15Q0P6D6 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC15Q0P6D6 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.89■□□□□ 0.3
CCDC15Q0P6D6 TCAF2P1-201ENST00000291129 2421 ntBASIC16.89■□□□□ 0.29
CCDC15Q0P6D6 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC15Q0P6D6 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC15Q0P6D6 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC15Q0P6D6 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC15Q0P6D6 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC15Q0P6D6 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC15Q0P6D6 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC15Q0P6D6 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC15Q0P6D6 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC15Q0P6D6 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC15Q0P6D6 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC15Q0P6D6 TFAMP1-201ENST00000412727 736 ntBASIC16.89■□□□□ 0.29
CCDC15Q0P6D6 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.89■□□□□ 0.29
CCDC15Q0P6D6 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
CCDC15Q0P6D6 TIMM8BP1-201ENST00000452384 211 ntBASIC16.89■□□□□ 0.29
CCDC15Q0P6D6 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC15Q0P6D6 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC15Q0P6D6 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.89■□□□□ 0.29
CCDC15Q0P6D6 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.89■□□□□ 0.29
CCDC15Q0P6D6 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.89■□□□□ 0.29
CCDC15Q0P6D6 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.89■□□□□ 0.29
CCDC15Q0P6D6 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC15Q0P6D6 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC15Q0P6D6 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC15Q0P6D6 ALOX12P2-203ENST00000570921 1945 ntBASIC16.89■□□□□ 0.29
CCDC15Q0P6D6 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC15Q0P6D6 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC15Q0P6D6 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC15Q0P6D6 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC15Q0P6D6 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms