Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC9.83□□□□□ -0.84
HSPG2P98160 GPAA1P2-202ENST00000606848 1787 ntBASIC9.83□□□□□ -0.84
HSPG2P98160 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC9.83□□□□□ -0.84
HSPG2P98160 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC9.83□□□□□ -0.84
HSPG2P98160 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
HSPG2P98160 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC9.83□□□□□ -0.84
HSPG2P98160 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC9.82□□□□□ -0.84
HSPG2P98160 BICD1-207ENST00000551848 1962 ntBASIC9.82□□□□□ -0.84
HSPG2P98160 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
HSPG2P98160 AC004408.2-201ENST00000623613 2777 ntBASIC9.82□□□□□ -0.84
HSPG2P98160 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC9.82□□□□□ -0.84
HSPG2P98160 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC9.82□□□□□ -0.84
HSPG2P98160 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
HSPG2P98160 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC9.82□□□□□ -0.84
HSPG2P98160 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC9.82□□□□□ -0.84
HSPG2P98160 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
HSPG2P98160 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC9.82□□□□□ -0.84
HSPG2P98160 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC9.82□□□□□ -0.84
HSPG2P98160 PLS3-210ENST00000626746 216 ntTSL 4 BASIC9.82□□□□□ -0.84
HSPG2P98160 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC9.82□□□□□ -0.84
HSPG2P98160 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
HSPG2P98160 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC9.82□□□□□ -0.84
HSPG2P98160 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
HSPG2P98160 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
HSPG2P98160 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
HSPG2P98160 AC012362.1-201ENST00000434906 739 ntBASIC9.82□□□□□ -0.84
HSPG2P98160 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC9.82□□□□□ -0.84
HSPG2P98160 AC107373.2-201ENST00000607735 490 ntBASIC9.82□□□□□ -0.84
HSPG2P98160 COX6A1P2-201ENST00000620597 330 ntBASIC9.82□□□□□ -0.84
HSPG2P98160 ETV2-208ENST00000621247 941 ntTSL 5 BASIC9.82□□□□□ -0.84
HSPG2P98160 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
HSPG2P98160 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
HSPG2P98160 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
HSPG2P98160 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
HSPG2P98160 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC9.82□□□□□ -0.84
HSPG2P98160 ZBTB45P2-201ENST00000452245 1531 ntBASIC9.82□□□□□ -0.84
HSPG2P98160 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
HSPG2P98160 RHBDF1P1-201ENST00000427504 1941 ntBASIC9.82□□□□□ -0.84
HSPG2P98160 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
HSPG2P98160 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
HSPG2P98160 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
HSPG2P98160 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
HSPG2P98160 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC9.82□□□□□ -0.84
HSPG2P98160 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
HSPG2P98160 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC9.82□□□□□ -0.84
HSPG2P98160 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC9.82□□□□□ -0.84
HSPG2P98160 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC9.82□□□□□ -0.84
HSPG2P98160 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
HSPG2P98160 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
HSPG2P98160 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC9.82□□□□□ -0.84
HSPG2P98160 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
HSPG2P98160 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
HSPG2P98160 AC103988.2-201ENST00000561804 725 ntBASIC9.82□□□□□ -0.84
HSPG2P98160 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC9.82□□□□□ -0.84
HSPG2P98160 RN7SL596P-201ENST00000582123 288 ntBASIC9.82□□□□□ -0.84
HSPG2P98160 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
HSPG2P98160 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
HSPG2P98160 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
HSPG2P98160 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
HSPG2P98160 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
HSPG2P98160 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
HSPG2P98160 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
HSPG2P98160 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
HSPG2P98160 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
HSPG2P98160 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
HSPG2P98160 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC9.82□□□□□ -0.84
HSPG2P98160 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC9.82□□□□□ -0.84
HSPG2P98160 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC9.82□□□□□ -0.84
HSPG2P98160 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC9.82□□□□□ -0.84
HSPG2P98160 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
HSPG2P98160 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
HSPG2P98160 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
HSPG2P98160 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
HSPG2P98160 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
HSPG2P98160 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC9.81□□□□□ -0.84
HSPG2P98160 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC9.81□□□□□ -0.84
HSPG2P98160 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC9.81□□□□□ -0.84
HSPG2P98160 AC026316.1-201ENST00000398900 414 ntBASIC9.81□□□□□ -0.84
HSPG2P98160 AL161670.2-201ENST00000557650 1227 ntBASIC9.81□□□□□ -0.84
HSPG2P98160 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC9.81□□□□□ -0.84
HSPG2P98160 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC9.81□□□□□ -0.84
HSPG2P98160 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC9.81□□□□□ -0.84
HSPG2P98160 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC9.81□□□□□ -0.84
HSPG2P98160 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
HSPG2P98160 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
HSPG2P98160 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
HSPG2P98160 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
HSPG2P98160 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
HSPG2P98160 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
HSPG2P98160 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
HSPG2P98160 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
HSPG2P98160 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
HSPG2P98160 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
HSPG2P98160 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
HSPG2P98160 HNRNPA1P63-201ENST00000427917 963 ntBASIC9.81□□□□□ -0.84
HSPG2P98160 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC9.81□□□□□ -0.84
HSPG2P98160 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC9.81□□□□□ -0.84
HSPG2P98160 NCK2-206ENST00000522586 490 ntTSL 5 BASIC9.81□□□□□ -0.84
HSPG2P98160 AL022344.2-201ENST00000568976 968 ntBASIC9.81□□□□□ -0.84
HSPG2P98160 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC9.81□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms