Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
CX3CL1P78423 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.18□□□□□ -0.3
CX3CL1P78423 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CX3CL1P78423 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CX3CL1P78423 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CX3CL1P78423 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CX3CL1P78423 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CX3CL1P78423 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CX3CL1P78423 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CX3CL1P78423 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.18□□□□□ -0.3
CX3CL1P78423 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.18□□□□□ -0.3
CX3CL1P78423 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC13.18□□□□□ -0.3
CX3CL1P78423 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CX3CL1P78423 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.18□□□□□ -0.3
CX3CL1P78423 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CX3CL1P78423 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.17□□□□□ -0.3
CX3CL1P78423 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CX3CL1P78423 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CX3CL1P78423 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CX3CL1P78423 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CX3CL1P78423 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CX3CL1P78423 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CX3CL1P78423 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CX3CL1P78423 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CX3CL1P78423 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
CX3CL1P78423 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.17□□□□□ -0.3
CX3CL1P78423 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CX3CL1P78423 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CX3CL1P78423 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CX3CL1P78423 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CX3CL1P78423 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
CX3CL1P78423 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CX3CL1P78423 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CX3CL1P78423 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CX3CL1P78423 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.17□□□□□ -0.3
CX3CL1P78423 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.17□□□□□ -0.3
CX3CL1P78423 AC023274.1-201ENST00000418278 595 ntBASIC13.17□□□□□ -0.3
CX3CL1P78423 AC140658.5-201ENST00000438532 169 ntBASIC13.17□□□□□ -0.3
CX3CL1P78423 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.17□□□□□ -0.3
CX3CL1P78423 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.17□□□□□ -0.3
CX3CL1P78423 AC109635.5-201ENST00000533593 962 ntBASIC13.17□□□□□ -0.3
CX3CL1P78423 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.17□□□□□ -0.3
CX3CL1P78423 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CX3CL1P78423 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.17□□□□□ -0.3
CX3CL1P78423 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.17□□□□□ -0.3
CX3CL1P78423 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.17□□□□□ -0.3
CX3CL1P78423 AL009183.1-201ENST00000603760 355 ntBASIC13.17□□□□□ -0.3
CX3CL1P78423 AC020765.3-201ENST00000613051 740 ntBASIC13.17□□□□□ -0.3
CX3CL1P78423 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.17□□□□□ -0.3
CX3CL1P78423 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.17□□□□□ -0.3
CX3CL1P78423 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.17□□□□□ -0.3
CX3CL1P78423 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CX3CL1P78423 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CX3CL1P78423 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CX3CL1P78423 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CX3CL1P78423 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.17□□□□□ -0.3
CX3CL1P78423 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.17□□□□□ -0.3
CX3CL1P78423 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.17□□□□□ -0.3
CX3CL1P78423 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
CX3CL1P78423 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CX3CL1P78423 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.17□□□□□ -0.3
CX3CL1P78423 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CX3CL1P78423 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.17□□□□□ -0.3
CX3CL1P78423 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CX3CL1P78423 AC092384.3-202ENST00000564646 2873 ntBASIC13.17□□□□□ -0.3
CX3CL1P78423 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CX3CL1P78423 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CX3CL1P78423 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CX3CL1P78423 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CX3CL1P78423 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CX3CL1P78423 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CX3CL1P78423 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CX3CL1P78423 PCGF3-213ENST00000620529 1899 ntBASIC13.16□□□□□ -0.3
CX3CL1P78423 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CL1P78423 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CL1P78423 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.16□□□□□ -0.3
CX3CL1P78423 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CL1P78423 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.16□□□□□ -0.3
CX3CL1P78423 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CL1P78423 ME2P1-201ENST00000426028 1970 ntBASIC13.16□□□□□ -0.3
CX3CL1P78423 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CL1P78423 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CL1P78423 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CX3CL1P78423 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
CX3CL1P78423 MIR600HG-201ENST00000449175 5984 ntBASIC13.16□□□□□ -0.3
CX3CL1P78423 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.16□□□□□ -0.3
CX3CL1P78423 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CX3CL1P78423 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.16□□□□□ -0.3
CX3CL1P78423 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.16□□□□□ -0.3
CX3CL1P78423 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CL1P78423 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CL1P78423 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CL1P78423 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.16□□□□□ -0.3
CX3CL1P78423 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.16□□□□□ -0.3
CX3CL1P78423 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CL1P78423 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.16□□□□□ -0.3
CX3CL1P78423 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.16□□□□□ -0.3
CX3CL1P78423 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.16□□□□□ -0.3
CX3CL1P78423 AC040169.1-201ENST00000565382 521 ntBASIC13.16□□□□□ -0.3
CX3CL1P78423 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms