Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
GFRA1P56159 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.52□□□□□ -0.08
GFRA1P56159 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
GFRA1P56159 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
GFRA1P56159 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GFRA1P56159 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.52□□□□□ -0.09
GFRA1P56159 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GFRA1P56159 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GFRA1P56159 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.52□□□□□ -0.09
GFRA1P56159 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.52□□□□□ -0.09
GFRA1P56159 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.52□□□□□ -0.09
GFRA1P56159 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.52□□□□□ -0.09
GFRA1P56159 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.52□□□□□ -0.09
GFRA1P56159 ZNF890P-202ENST00000530367 1156 ntBASIC14.52□□□□□ -0.09
GFRA1P56159 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GFRA1P56159 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.52□□□□□ -0.09
GFRA1P56159 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.52□□□□□ -0.09
GFRA1P56159 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GFRA1P56159 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
GFRA1P56159 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
GFRA1P56159 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.52□□□□□ -0.09
GFRA1P56159 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.52□□□□□ -0.09
GFRA1P56159 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.52□□□□□ -0.09
GFRA1P56159 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GFRA1P56159 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
GFRA1P56159 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
GFRA1P56159 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.52□□□□□ -0.09
GFRA1P56159 AL139384.1-201ENST00000612143 3047 ntBASIC14.52□□□□□ -0.09
GFRA1P56159 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GFRA1P56159 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
GFRA1P56159 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GFRA1P56159 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
GFRA1P56159 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GFRA1P56159 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GFRA1P56159 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GFRA1P56159 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.51□□□□□ -0.09
GFRA1P56159 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.51□□□□□ -0.09
GFRA1P56159 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GFRA1P56159 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
GFRA1P56159 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
GFRA1P56159 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
GFRA1P56159 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GFRA1P56159 AC011270.2-201ENST00000624293 2550 ntBASIC14.51□□□□□ -0.09
GFRA1P56159 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GFRA1P56159 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GFRA1P56159 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
GFRA1P56159 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GFRA1P56159 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GFRA1P56159 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.51□□□□□ -0.09
GFRA1P56159 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GFRA1P56159 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GFRA1P56159 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
GFRA1P56159 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GFRA1P56159 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GFRA1P56159 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.51□□□□□ -0.09
GFRA1P56159 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
GFRA1P56159 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GFRA1P56159 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
GFRA1P56159 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GFRA1P56159 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GFRA1P56159 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GFRA1P56159 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GFRA1P56159 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GFRA1P56159 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
GFRA1P56159 AC004987.2-201ENST00000395959 1148 ntBASIC14.51□□□□□ -0.09
GFRA1P56159 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.51□□□□□ -0.09
GFRA1P56159 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.51□□□□□ -0.09
GFRA1P56159 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GFRA1P56159 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
GFRA1P56159 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.51□□□□□ -0.09
GFRA1P56159 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.51□□□□□ -0.09
GFRA1P56159 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.51□□□□□ -0.09
GFRA1P56159 TSPY16P-201ENST00000449843 468 ntBASIC14.51□□□□□ -0.09
GFRA1P56159 SERBP1P3-201ENST00000459980 809 ntBASIC14.51□□□□□ -0.09
GFRA1P56159 AC243562.2-201ENST00000561247 970 ntBASIC14.51□□□□□ -0.09
GFRA1P56159 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.51□□□□□ -0.09
GFRA1P56159 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.51□□□□□ -0.09
GFRA1P56159 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.51□□□□□ -0.09
GFRA1P56159 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
GFRA1P56159 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
GFRA1P56159 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
GFRA1P56159 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.51□□□□□ -0.09
GFRA1P56159 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
GFRA1P56159 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
GFRA1P56159 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
GFRA1P56159 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
GFRA1P56159 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.51□□□□□ -0.09
GFRA1P56159 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
GFRA1P56159 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GFRA1P56159 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.5□□□□□ -0.09
GFRA1P56159 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
GFRA1P56159 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GFRA1P56159 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
GFRA1P56159 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GFRA1P56159 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GFRA1P56159 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
GFRA1P56159 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
GFRA1P56159 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GFRA1P56159 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GFRA1P56159 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms