Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.24□□□□□ -0.13
FOXG1P55316 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXG1P55316 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXG1P55316 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
FOXG1P55316 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
FOXG1P55316 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXG1P55316 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXG1P55316 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
FOXG1P55316 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FOXG1P55316 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
FOXG1P55316 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXG1P55316 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FOXG1P55316 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXG1P55316 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXG1P55316 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.23□□□□□ -0.13
FOXG1P55316 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXG1P55316 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXG1P55316 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXG1P55316 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FOXG1P55316 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.23□□□□□ -0.13
FOXG1P55316 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXG1P55316 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
FOXG1P55316 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
FOXG1P55316 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
FOXG1P55316 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
FOXG1P55316 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
FOXG1P55316 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.23□□□□□ -0.13
FOXG1P55316 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
FOXG1P55316 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
FOXG1P55316 AC069120.2-201ENST00000524091 540 ntBASIC14.23□□□□□ -0.13
FOXG1P55316 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.23□□□□□ -0.13
FOXG1P55316 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.23□□□□□ -0.13
FOXG1P55316 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.23□□□□□ -0.13
FOXG1P55316 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.23□□□□□ -0.13
FOXG1P55316 AL365330.1-201ENST00000607459 531 ntBASIC14.23□□□□□ -0.13
FOXG1P55316 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
FOXG1P55316 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FOXG1P55316 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXG1P55316 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
FOXG1P55316 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXG1P55316 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXG1P55316 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXG1P55316 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.23□□□□□ -0.13
FOXG1P55316 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FOXG1P55316 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
FOXG1P55316 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FOXG1P55316 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXG1P55316 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.23□□□□□ -0.13
FOXG1P55316 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FOXG1P55316 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
FOXG1P55316 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
FOXG1P55316 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
FOXG1P55316 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.22□□□□□ -0.13
FOXG1P55316 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
FOXG1P55316 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.22□□□□□ -0.13
FOXG1P55316 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
FOXG1P55316 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.22□□□□□ -0.13
FOXG1P55316 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXG1P55316 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.22□□□□□ -0.13
FOXG1P55316 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXG1P55316 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
FOXG1P55316 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXG1P55316 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
FOXG1P55316 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
FOXG1P55316 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.22□□□□□ -0.13
FOXG1P55316 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXG1P55316 MIR770-201ENST00000390219 98 ntBASIC14.22□□□□□ -0.13
FOXG1P55316 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.22□□□□□ -0.13
FOXG1P55316 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.22□□□□□ -0.13
FOXG1P55316 AC055876.3-201ENST00000431496 288 ntBASIC14.22□□□□□ -0.13
FOXG1P55316 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
FOXG1P55316 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.22□□□□□ -0.13
FOXG1P55316 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
FOXG1P55316 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.22□□□□□ -0.13
FOXG1P55316 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.22□□□□□ -0.13
FOXG1P55316 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.22□□□□□ -0.13
FOXG1P55316 AC138649.4-201ENST00000612222 287 ntBASIC14.22□□□□□ -0.13
FOXG1P55316 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
FOXG1P55316 AL138828.2-201ENST00000615812 383 ntBASIC14.22□□□□□ -0.13
FOXG1P55316 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXG1P55316 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXG1P55316 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.22□□□□□ -0.13
FOXG1P55316 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
FOXG1P55316 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXG1P55316 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXG1P55316 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.22□□□□□ -0.13
FOXG1P55316 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.22□□□□□ -0.13
FOXG1P55316 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXG1P55316 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXG1P55316 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.22□□□□□ -0.13
FOXG1P55316 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
FOXG1P55316 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXG1P55316 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
FOXG1P55316 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
FOXG1P55316 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
FOXG1P55316 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FOXG1P55316 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
FOXG1P55316 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.21□□□□□ -0.13
FOXG1P55316 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FOXG1P55316 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms