Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDH6P55285 LINC02447-202ENST00000501888 2146 ntBASIC16.95■□□□□ 0.3
CDH6P55285 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDH6P55285 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.95■□□□□ 0.3
CDH6P55285 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDH6P55285 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.95■□□□□ 0.3
CDH6P55285 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.95■□□□□ 0.3
CDH6P55285 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDH6P55285 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH6P55285 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH6P55285 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH6P55285 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDH6P55285 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.95■□□□□ 0.3
CDH6P55285 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH6P55285 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.95■□□□□ 0.3
CDH6P55285 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDH6P55285 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CDH6P55285 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CDH6P55285 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CDH6P55285 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH6P55285 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.94■□□□□ 0.3
CDH6P55285 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH6P55285 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CDH6P55285 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH6P55285 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.94■□□□□ 0.3
CDH6P55285 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.94■□□□□ 0.3
CDH6P55285 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CDH6P55285 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDH6P55285 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH6P55285 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH6P55285 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDH6P55285 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.94■□□□□ 0.3
CDH6P55285 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.94■□□□□ 0.3
CDH6P55285 AC004832.2-201ENST00000426397 482 ntBASIC16.94■□□□□ 0.3
CDH6P55285 FAM58CP-201ENST00000435741 640 ntBASIC16.94■□□□□ 0.3
CDH6P55285 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
CDH6P55285 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.94■□□□□ 0.3
CDH6P55285 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.94■□□□□ 0.3
CDH6P55285 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH6P55285 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH6P55285 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.94■□□□□ 0.3
CDH6P55285 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDH6P55285 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDH6P55285 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CDH6P55285 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH6P55285 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CDH6P55285 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH6P55285 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH6P55285 AL589702.1-201ENST00000641229 1509 ntBASIC16.94■□□□□ 0.3
CDH6P55285 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH6P55285 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.94■□□□□ 0.3
CDH6P55285 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
CDH6P55285 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH6P55285 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH6P55285 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CDH6P55285 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.94■□□□□ 0.3
CDH6P55285 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDH6P55285 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH6P55285 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.94■□□□□ 0.3
CDH6P55285 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH6P55285 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
CDH6P55285 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH6P55285 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH6P55285 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.93■□□□□ 0.3
CDH6P55285 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
CDH6P55285 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH6P55285 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH6P55285 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH6P55285 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH6P55285 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH6P55285 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH6P55285 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH6P55285 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH6P55285 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH6P55285 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.93■□□□□ 0.3
CDH6P55285 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH6P55285 MCCD1P2-201ENST00000423228 335 ntBASIC16.93■□□□□ 0.3
CDH6P55285 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH6P55285 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH6P55285 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.93■□□□□ 0.3
CDH6P55285 AL138918.1-201ENST00000568306 659 ntBASIC16.93■□□□□ 0.3
CDH6P55285 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH6P55285 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH6P55285 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH6P55285 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.93■□□□□ 0.3
CDH6P55285 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH6P55285 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CDH6P55285 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH6P55285 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH6P55285 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH6P55285 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH6P55285 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH6P55285 AC069224.1-201ENST00000566372 1715 ntBASIC16.93■□□□□ 0.3
CDH6P55285 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH6P55285 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CDH6P55285 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH6P55285 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH6P55285 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH6P55285 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
CDH6P55285 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms