Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC19.91■□□□□ 0.78
NUP98P52948 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC19.91■□□□□ 0.78
NUP98P52948 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NUP98P52948 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NUP98P52948 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
NUP98P52948 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NUP98P52948 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NUP98P52948 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
NUP98P52948 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NUP98P52948 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NUP98P52948 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC19.91■□□□□ 0.78
NUP98P52948 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NUP98P52948 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NUP98P52948 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC19.91■□□□□ 0.78
NUP98P52948 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NUP98P52948 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC19.91■□□□□ 0.78
NUP98P52948 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
NUP98P52948 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.9■□□□□ 0.78
NUP98P52948 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
NUP98P52948 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.9■□□□□ 0.78
NUP98P52948 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC19.9■□□□□ 0.78
NUP98P52948 AL355864.2-201ENST00000447420 863 ntBASIC19.9■□□□□ 0.78
NUP98P52948 SLC25A47P1-201ENST00000531577 414 ntBASIC19.9■□□□□ 0.78
NUP98P52948 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC19.9■□□□□ 0.78
NUP98P52948 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NUP98P52948 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
NUP98P52948 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
NUP98P52948 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NUP98P52948 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC19.9■□□□□ 0.78
NUP98P52948 AC106820.2-201ENST00000563775 3264 ntBASIC19.9■□□□□ 0.78
NUP98P52948 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NUP98P52948 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.9■□□□□ 0.78
NUP98P52948 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.9■□□□□ 0.78
NUP98P52948 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC19.9■□□□□ 0.78
NUP98P52948 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NUP98P52948 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC19.9■□□□□ 0.78
NUP98P52948 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NUP98P52948 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC19.9■□□□□ 0.78
NUP98P52948 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NUP98P52948 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC19.9■□□□□ 0.78
NUP98P52948 RPL13AP25-201ENST00000484130 612 ntBASIC19.9■□□□□ 0.78
NUP98P52948 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC19.9■□□□□ 0.78
NUP98P52948 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.9■□□□□ 0.78
NUP98P52948 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NUP98P52948 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.9■□□□□ 0.78
NUP98P52948 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.78
NUP98P52948 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
NUP98P52948 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
NUP98P52948 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
NUP98P52948 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
NUP98P52948 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
NUP98P52948 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NUP98P52948 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
NUP98P52948 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NUP98P52948 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.89■□□□□ 0.77
NUP98P52948 MTHFR-217ENST00000641820 1569 ntBASIC19.89■□□□□ 0.77
NUP98P52948 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
NUP98P52948 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NUP98P52948 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC19.89■□□□□ 0.77
NUP98P52948 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NUP98P52948 TECR-220ENST00000600083 1204 ntTSL 2 BASIC19.89■□□□□ 0.77
NUP98P52948 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NUP98P52948 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
NUP98P52948 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NUP98P52948 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.89■□□□□ 0.77
NUP98P52948 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
NUP98P52948 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
NUP98P52948 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.88■□□□□ 0.77
NUP98P52948 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.88■□□□□ 0.77
NUP98P52948 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NUP98P52948 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NUP98P52948 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NUP98P52948 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NUP98P52948 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NUP98P52948 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
NUP98P52948 ACTG1P3-201ENST00000431775 1114 ntBASIC19.88■□□□□ 0.77
NUP98P52948 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC19.88■□□□□ 0.77
NUP98P52948 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC19.88■□□□□ 0.77
NUP98P52948 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC19.88■□□□□ 0.77
NUP98P52948 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NUP98P52948 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC19.88■□□□□ 0.77
NUP98P52948 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC19.88■□□□□ 0.77
NUP98P52948 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NUP98P52948 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NUP98P52948 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.88■□□□□ 0.77
NUP98P52948 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.88■□□□□ 0.77
NUP98P52948 CYP2AB1P-202ENST00000454440 1456 ntBASIC19.88■□□□□ 0.77
NUP98P52948 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NUP98P52948 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NUP98P52948 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NUP98P52948 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
NUP98P52948 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.88■□□□□ 0.77
NUP98P52948 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
NUP98P52948 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC19.88■□□□□ 0.77
NUP98P52948 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NUP98P52948 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
NUP98P52948 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC19.88■□□□□ 0.77
NUP98P52948 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC19.88■□□□□ 0.77
NUP98P52948 AC015910.1-201ENST00000579400 975 ntBASIC19.88■□□□□ 0.77
NUP98P52948 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms