Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.17■□□□□ 0.34
TUBP50607 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
TUBP50607 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.17■□□□□ 0.34
TUBP50607 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.17■□□□□ 0.34
TUBP50607 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.17■□□□□ 0.34
TUBP50607 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.17■□□□□ 0.34
TUBP50607 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.17■□□□□ 0.34
TUBP50607 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.17■□□□□ 0.34
TUBP50607 AC018529.1-201ENST00000613063 361 ntBASIC17.17■□□□□ 0.34
TUBP50607 AC007950.2-201ENST00000615045 2347 ntBASIC17.17■□□□□ 0.34
TUBP50607 AP3S2-216ENST00000617003 1561 ntBASIC17.17■□□□□ 0.34
TUBP50607 SPTSSB-204ENST00000617024 1292 ntBASIC17.17■□□□□ 0.34
TUBP50607 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TUBP50607 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TUBP50607 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TUBP50607 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.17■□□□□ 0.34
TUBP50607 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TUBP50607 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TUBP50607 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TUBP50607 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TUBP50607 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.16■□□□□ 0.34
TUBP50607 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TUBP50607 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TUBP50607 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.16■□□□□ 0.34
TUBP50607 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TUBP50607 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TUBP50607 GGT4P-201ENST00000623672 1708 ntBASIC17.16■□□□□ 0.34
TUBP50607 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TUBP50607 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TUBP50607 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TUBP50607 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
TUBP50607 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.16■□□□□ 0.34
TUBP50607 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TUBP50607 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TUBP50607 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TUBP50607 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TUBP50607 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TUBP50607 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.16■□□□□ 0.34
TUBP50607 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TUBP50607 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
TUBP50607 AC093724.1-201ENST00000448659 1027 ntBASIC17.16■□□□□ 0.34
TUBP50607 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.16■□□□□ 0.34
TUBP50607 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.16■□□□□ 0.34
TUBP50607 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.16■□□□□ 0.34
TUBP50607 AC011467.4-201ENST00000594891 528 ntBASIC17.16■□□□□ 0.34
TUBP50607 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TUBP50607 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.16■□□□□ 0.34
TUBP50607 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.16■□□□□ 0.34
TUBP50607 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TUBP50607 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TUBP50607 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TUBP50607 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TUBP50607 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TUBP50607 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TUBP50607 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TUBP50607 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TUBP50607 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
TUBP50607 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TUBP50607 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TUBP50607 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.16■□□□□ 0.34
TUBP50607 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TUBP50607 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.16■□□□□ 0.34
TUBP50607 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TUBP50607 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.15■□□□□ 0.34
TUBP50607 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBP50607 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBP50607 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBP50607 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBP50607 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBP50607 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBP50607 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBP50607 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TUBP50607 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TUBP50607 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBP50607 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBP50607 AC026691.1-201ENST00000602502 2017 ntBASIC17.15■□□□□ 0.34
TUBP50607 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBP50607 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBP50607 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.15■□□□□ 0.34
TUBP50607 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
TUBP50607 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
TUBP50607 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TUBP50607 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
TUBP50607 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TUBP50607 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.15■□□□□ 0.34
TUBP50607 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBP50607 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.15■□□□□ 0.34
TUBP50607 DUX4L27-201ENST00000554796 1261 ntBASIC17.15■□□□□ 0.34
TUBP50607 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TUBP50607 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.15■□□□□ 0.34
TUBP50607 AC005498.2-205ENST00000593218 784 ntBASIC17.15■□□□□ 0.34
TUBP50607 AL158211.3-201ENST00000607385 239 ntBASIC17.15■□□□□ 0.34
TUBP50607 AC007967.4-201ENST00000614700 386 ntBASIC17.15■□□□□ 0.34
TUBP50607 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBP50607 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TUBP50607 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TUBP50607 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBP50607 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.15■□□□□ 0.34
TUBP50607 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBP50607 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms