Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC11.05□□□□□ -0.64
CXCL5P42830 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC11.05□□□□□ -0.64
CXCL5P42830 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CXCL5P42830 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CXCL5P42830 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CXCL5P42830 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CXCL5P42830 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CXCL5P42830 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC11.05□□□□□ -0.64
CXCL5P42830 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CXCL5P42830 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
CXCL5P42830 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC11.05□□□□□ -0.64
CXCL5P42830 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
CXCL5P42830 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CXCL5P42830 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CXCL5P42830 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CXCL5P42830 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
CXCL5P42830 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
CXCL5P42830 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC11.05□□□□□ -0.64
CXCL5P42830 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC11.05□□□□□ -0.64
CXCL5P42830 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
CXCL5P42830 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
CXCL5P42830 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
CXCL5P42830 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
CXCL5P42830 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC11.04□□□□□ -0.64
CXCL5P42830 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
CXCL5P42830 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CXCL5P42830 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CXCL5P42830 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC11.04□□□□□ -0.64
CXCL5P42830 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
CXCL5P42830 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CXCL5P42830 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CXCL5P42830 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CXCL5P42830 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CXCL5P42830 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CXCL5P42830 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CXCL5P42830 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CXCL5P42830 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CXCL5P42830 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CXCL5P42830 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CXCL5P42830 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
CXCL5P42830 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
CXCL5P42830 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
CXCL5P42830 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
CXCL5P42830 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CXCL5P42830 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CXCL5P42830 IGHV3-47-201ENST00000425060 335 ntBASIC11.04□□□□□ -0.64
CXCL5P42830 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC11.04□□□□□ -0.64
CXCL5P42830 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC11.04□□□□□ -0.64
CXCL5P42830 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CXCL5P42830 LINC00265-3P-201ENST00000447588 903 ntBASIC11.04□□□□□ -0.64
CXCL5P42830 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC11.04□□□□□ -0.64
CXCL5P42830 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CXCL5P42830 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC11.04□□□□□ -0.64
CXCL5P42830 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CXCL5P42830 MIR4492-201ENST00000581627 80 ntBASIC11.04□□□□□ -0.64
CXCL5P42830 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
CXCL5P42830 AL589182.2-201ENST00000619332 1049 ntBASIC11.04□□□□□ -0.64
CXCL5P42830 AL139288.1-201ENST00000623748 933 ntBASIC11.04□□□□□ -0.64
CXCL5P42830 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
CXCL5P42830 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
CXCL5P42830 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
CXCL5P42830 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CXCL5P42830 AL353732.1-201ENST00000569618 1459 ntBASIC11.04□□□□□ -0.64
CXCL5P42830 PC-214ENST00000628663 1470 ntTSL 5 BASIC11.04□□□□□ -0.64
CXCL5P42830 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC11.04□□□□□ -0.64
CXCL5P42830 TNRC18P2-201ENST00000417666 2714 ntBASIC11.04□□□□□ -0.64
CXCL5P42830 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CXCL5P42830 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
CXCL5P42830 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
CXCL5P42830 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
CXCL5P42830 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
CXCL5P42830 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
CXCL5P42830 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
CXCL5P42830 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CXCL5P42830 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC11.04□□□□□ -0.64
CXCL5P42830 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
CXCL5P42830 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC11.04□□□□□ -0.64
CXCL5P42830 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
CXCL5P42830 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CXCL5P42830 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CXCL5P42830 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CXCL5P42830 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CXCL5P42830 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC11.03□□□□□ -0.64
CXCL5P42830 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CXCL5P42830 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CXCL5P42830 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CXCL5P42830 SNX33P1-201ENST00000592116 1762 ntBASIC11.03□□□□□ -0.64
CXCL5P42830 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CXCL5P42830 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CXCL5P42830 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC11.03□□□□□ -0.64
CXCL5P42830 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CXCL5P42830 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
CXCL5P42830 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CXCL5P42830 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CXCL5P42830 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CXCL5P42830 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CXCL5P42830 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CXCL5P42830 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CXCL5P42830 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC11.03□□□□□ -0.64
CXCL5P42830 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC11.03□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms