Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AP000867.4-201ENST00000641616 219 ntBASIC18.59■□□□□ 0.57
CLCN1P35523 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN1P35523 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN1P35523 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CLCN1P35523 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN1P35523 AL135999.2-201ENST00000622438 1686 ntBASIC18.59■□□□□ 0.57
CLCN1P35523 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN1P35523 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CLCN1P35523 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
CLCN1P35523 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC18.59■□□□□ 0.57
CLCN1P35523 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN1P35523 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CLCN1P35523 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CLCN1P35523 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CLCN1P35523 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CLCN1P35523 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
CLCN1P35523 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLCN1P35523 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLCN1P35523 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.58■□□□□ 0.57
CLCN1P35523 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC18.58■□□□□ 0.57
CLCN1P35523 OS9-204ENST00000389146 2091 ntTSL 2 BASIC18.58■□□□□ 0.57
CLCN1P35523 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLCN1P35523 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLCN1P35523 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLCN1P35523 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CLCN1P35523 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.56
CLCN1P35523 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC18.58■□□□□ 0.56
CLCN1P35523 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLCN1P35523 STK33P1-201ENST00000423835 1218 ntBASIC18.58■□□□□ 0.56
CLCN1P35523 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.58■□□□□ 0.56
CLCN1P35523 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.58■□□□□ 0.56
CLCN1P35523 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLCN1P35523 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLCN1P35523 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CLCN1P35523 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLCN1P35523 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CLCN1P35523 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.58■□□□□ 0.56
CLCN1P35523 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLCN1P35523 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
CLCN1P35523 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLCN1P35523 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLCN1P35523 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.58■□□□□ 0.56
CLCN1P35523 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.58■□□□□ 0.56
CLCN1P35523 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLCN1P35523 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
CLCN1P35523 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC18.58■□□□□ 0.56
CLCN1P35523 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.56
CLCN1P35523 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLCN1P35523 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCN1P35523 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCN1P35523 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.57■□□□□ 0.56
CLCN1P35523 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCN1P35523 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CLCN1P35523 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCN1P35523 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCN1P35523 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLCN1P35523 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLCN1P35523 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCN1P35523 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCN1P35523 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCN1P35523 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
CLCN1P35523 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLCN1P35523 AC003669.1-201ENST00000334569 611 ntBASIC18.57■□□□□ 0.56
CLCN1P35523 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
CLCN1P35523 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLCN1P35523 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.57■□□□□ 0.56
CLCN1P35523 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLCN1P35523 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
CLCN1P35523 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.57■□□□□ 0.56
CLCN1P35523 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.57■□□□□ 0.56
CLCN1P35523 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCN1P35523 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.57■□□□□ 0.56
CLCN1P35523 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.57■□□□□ 0.56
CLCN1P35523 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.57■□□□□ 0.56
CLCN1P35523 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.57■□□□□ 0.56
CLCN1P35523 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.57■□□□□ 0.56
CLCN1P35523 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.57■□□□□ 0.56
CLCN1P35523 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCN1P35523 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCN1P35523 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLCN1P35523 NORAD-201ENST00000565493 5339 ntBASIC18.57■□□□□ 0.56
CLCN1P35523 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCN1P35523 AC013726.1-201ENST00000563747 2285 ntBASIC18.57■□□□□ 0.56
CLCN1P35523 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLCN1P35523 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLCN1P35523 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCN1P35523 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.57■□□□□ 0.56
CLCN1P35523 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.57■□□□□ 0.56
CLCN1P35523 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCN1P35523 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLCN1P35523 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLCN1P35523 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.56■□□□□ 0.56
CLCN1P35523 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLCN1P35523 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLCN1P35523 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CLCN1P35523 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.56■□□□□ 0.56
CLCN1P35523 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CLCN1P35523 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
CLCN1P35523 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLCN1P35523 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms