Protein–RNA interactions for Protein: P27815

PDE4A, cAMP-specific 3',5'-cyclic phosphodiesterase 4A, humanhuman

Predictions only

Length 886 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4AP27815 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDE4AP27815 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDE4AP27815 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC20.52■□□□□ 0.88
PDE4AP27815 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC20.52■□□□□ 0.87
PDE4AP27815 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
PDE4AP27815 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
PDE4AP27815 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
PDE4AP27815 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PDE4AP27815 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
PDE4AP27815 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PDE4AP27815 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PDE4AP27815 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE4AP27815 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PDE4AP27815 PGR-210ENST00000619228 3038 ntTSL 5 BASIC20.51■□□□□ 0.87
PDE4AP27815 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE4AP27815 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC20.51■□□□□ 0.87
PDE4AP27815 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE4AP27815 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE4AP27815 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDE4AP27815 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE4AP27815 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDE4AP27815 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE4AP27815 WDR53-204ENST00000433160 887 ntTSL 5 BASIC20.51■□□□□ 0.87
PDE4AP27815 FAM185BP-201ENST00000443595 716 ntBASIC20.51■□□□□ 0.87
PDE4AP27815 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.51■□□□□ 0.87
PDE4AP27815 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC20.51■□□□□ 0.87
PDE4AP27815 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.51■□□□□ 0.87
PDE4AP27815 RN7SL510P-201ENST00000581311 263 ntBASIC20.51■□□□□ 0.87
PDE4AP27815 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE4AP27815 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
PDE4AP27815 AL121894.2-201ENST00000602977 491 ntBASIC20.51■□□□□ 0.87
PDE4AP27815 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDE4AP27815 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PDE4AP27815 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE4AP27815 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE4AP27815 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE4AP27815 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PDE4AP27815 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC20.51■□□□□ 0.87
PDE4AP27815 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PDE4AP27815 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PDE4AP27815 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE4AP27815 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE4AP27815 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE4AP27815 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
PDE4AP27815 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE4AP27815 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PDE4AP27815 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE4AP27815 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
PDE4AP27815 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC20.5■□□□□ 0.87
PDE4AP27815 LINC01144-201ENST00000626198 1710 ntBASIC20.5■□□□□ 0.87
PDE4AP27815 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE4AP27815 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE4AP27815 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE4AP27815 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC20.5■□□□□ 0.87
PDE4AP27815 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE4AP27815 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PDE4AP27815 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE4AP27815 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.5■□□□□ 0.87
PDE4AP27815 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDE4AP27815 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE4AP27815 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.5■□□□□ 0.87
PDE4AP27815 HCG4-201ENST00000418983 998 ntBASIC20.5■□□□□ 0.87
PDE4AP27815 CDK2AP2P3-201ENST00000422476 372 ntBASIC20.5■□□□□ 0.87
PDE4AP27815 SERPINA7P1-201ENST00000443077 631 ntBASIC20.5■□□□□ 0.87
PDE4AP27815 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.5■□□□□ 0.87
PDE4AP27815 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.5■□□□□ 0.87
PDE4AP27815 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
PDE4AP27815 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.5■□□□□ 0.87
PDE4AP27815 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.5■□□□□ 0.87
PDE4AP27815 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
PDE4AP27815 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE4AP27815 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC20.5■□□□□ 0.87
PDE4AP27815 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE4AP27815 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDE4AP27815 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE4AP27815 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC20.5■□□□□ 0.87
PDE4AP27815 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDE4AP27815 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDE4AP27815 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDE4AP27815 AP003680.1-201ENST00000598970 3660 ntBASIC20.49■□□□□ 0.87
PDE4AP27815 AL009178.2-201ENST00000597278 2719 ntBASIC20.49■□□□□ 0.87
PDE4AP27815 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC20.49■□□□□ 0.87
PDE4AP27815 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDE4AP27815 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDE4AP27815 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDE4AP27815 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PDE4AP27815 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC20.49■□□□□ 0.87
PDE4AP27815 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC20.49■□□□□ 0.87
PDE4AP27815 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PDE4AP27815 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC20.49■□□□□ 0.87
PDE4AP27815 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PDE4AP27815 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDE4AP27815 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PDE4AP27815 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDE4AP27815 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.49■□□□□ 0.87
PDE4AP27815 MRPL3P1-201ENST00000400109 1033 ntBASIC20.49■□□□□ 0.87
PDE4AP27815 MRPL20P1-201ENST00000400819 433 ntBASIC20.49■□□□□ 0.87
PDE4AP27815 IGLL3P-201ENST00000412472 434 ntBASIC20.49■□□□□ 0.87
PDE4AP27815 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.49■□□□□ 0.87
PDE4AP27815 AP002469.2-201ENST00000531724 424 ntBASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms