Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.18■□□□□ 0.5
COL11A1P12107 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL11A1P12107 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL11A1P12107 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL11A1P12107 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
COL11A1P12107 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.18■□□□□ 0.5
COL11A1P12107 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.18■□□□□ 0.5
COL11A1P12107 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC18.18■□□□□ 0.5
COL11A1P12107 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL11A1P12107 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.18■□□□□ 0.5
COL11A1P12107 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC18.18■□□□□ 0.5
COL11A1P12107 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
COL11A1P12107 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC18.18■□□□□ 0.5
COL11A1P12107 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL11A1P12107 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.18■□□□□ 0.5
COL11A1P12107 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
COL11A1P12107 AL607033.1-201ENST00000623900 1599 ntBASIC18.18■□□□□ 0.5
COL11A1P12107 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL11A1P12107 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL11A1P12107 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.18■□□□□ 0.5
COL11A1P12107 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL11A1P12107 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.18■□□□□ 0.5
COL11A1P12107 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.18■□□□□ 0.5
COL11A1P12107 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL11A1P12107 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
COL11A1P12107 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL11A1P12107 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL11A1P12107 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
COL11A1P12107 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL11A1P12107 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.17■□□□□ 0.5
COL11A1P12107 AC022210.1-201ENST00000449856 793 ntBASIC18.17■□□□□ 0.5
COL11A1P12107 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.17■□□□□ 0.5
COL11A1P12107 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC18.17■□□□□ 0.5
COL11A1P12107 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL11A1P12107 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.17■□□□□ 0.5
COL11A1P12107 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.17■□□□□ 0.5
COL11A1P12107 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.17■□□□□ 0.5
COL11A1P12107 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.17■□□□□ 0.5
COL11A1P12107 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.17■□□□□ 0.5
COL11A1P12107 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
COL11A1P12107 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL11A1P12107 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL11A1P12107 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.17■□□□□ 0.5
COL11A1P12107 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL11A1P12107 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
COL11A1P12107 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
COL11A1P12107 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL11A1P12107 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.17■□□□□ 0.5
COL11A1P12107 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL11A1P12107 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL11A1P12107 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL11A1P12107 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
COL11A1P12107 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.16■□□□□ 0.5
COL11A1P12107 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18.16■□□□□ 0.5
COL11A1P12107 CSF2RBP1-201ENST00000447905 391 ntBASIC18.16■□□□□ 0.5
COL11A1P12107 KRT18P43-201ENST00000469825 1281 ntBASIC18.16■□□□□ 0.5
COL11A1P12107 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
COL11A1P12107 AL359711.2-201ENST00000563105 872 ntBASIC18.16■□□□□ 0.5
COL11A1P12107 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.16■□□□□ 0.5
COL11A1P12107 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL11A1P12107 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.16■□□□□ 0.5
COL11A1P12107 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.16■□□□□ 0.5
COL11A1P12107 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COL11A1P12107 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL11A1P12107 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.16■□□□□ 0.5
COL11A1P12107 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL11A1P12107 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL11A1P12107 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
COL11A1P12107 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL11A1P12107 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
COL11A1P12107 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COL11A1P12107 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
COL11A1P12107 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.16■□□□□ 0.5
COL11A1P12107 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18.16■□□□□ 0.5
COL11A1P12107 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC18.16■□□□□ 0.5
COL11A1P12107 TDH-203ENST00000531764 1110 ntBASIC18.16■□□□□ 0.5
COL11A1P12107 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL11A1P12107 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC18.16■□□□□ 0.5
COL11A1P12107 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.16■□□□□ 0.5
COL11A1P12107 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL11A1P12107 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC18.16■□□□□ 0.5
COL11A1P12107 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.16■□□□□ 0.5
COL11A1P12107 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
COL11A1P12107 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL11A1P12107 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.15■□□□□ 0.5
COL11A1P12107 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL11A1P12107 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.15■□□□□ 0.5
COL11A1P12107 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL11A1P12107 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL11A1P12107 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL11A1P12107 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.15■□□□□ 0.5
COL11A1P12107 MSTO2P-201ENST00000314835 1709 ntBASIC18.15■□□□□ 0.5
COL11A1P12107 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL11A1P12107 AC134915.1-201ENST00000426461 574 ntBASIC18.15■□□□□ 0.5
COL11A1P12107 AC106760.1-201ENST00000508690 800 ntBASIC18.15■□□□□ 0.5
COL11A1P12107 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.15■□□□□ 0.5
COL11A1P12107 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC18.15■□□□□ 0.5
COL11A1P12107 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.15■□□□□ 0.5
COL11A1P12107 MFF-223ENST00000524634 647 ntTSL 2 BASIC18.15■□□□□ 0.5
COL11A1P12107 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms