Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBL4AP11441 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
UBL4AP11441 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
UBL4AP11441 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBL4AP11441 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.13■□□□□ 0.01
UBL4AP11441 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBL4AP11441 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBL4AP11441 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBL4AP11441 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBL4AP11441 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBL4AP11441 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBL4AP11441 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBL4AP11441 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBL4AP11441 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBL4AP11441 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
UBL4AP11441 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
UBL4AP11441 KRT18P34-201ENST00000488218 1270 ntBASIC15.13■□□□□ 0.01
UBL4AP11441 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
UBL4AP11441 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.13■□□□□ 0.01
UBL4AP11441 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.13■□□□□ 0.01
UBL4AP11441 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.13■□□□□ 0.01
UBL4AP11441 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
UBL4AP11441 AC092865.6-201ENST00000642101 219 ntBASIC15.13■□□□□ 0.01
UBL4AP11441 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBL4AP11441 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBL4AP11441 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBL4AP11441 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
UBL4AP11441 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
UBL4AP11441 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
UBL4AP11441 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.13■□□□□ 0.01
UBL4AP11441 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBL4AP11441 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBL4AP11441 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
UBL4AP11441 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBL4AP11441 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBL4AP11441 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
UBL4AP11441 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.13■□□□□ 0.01
UBL4AP11441 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBL4AP11441 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBL4AP11441 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBL4AP11441 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UBL4AP11441 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.12■□□□□ 0.01
UBL4AP11441 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBL4AP11441 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBL4AP11441 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC15.12■□□□□ 0.01
UBL4AP11441 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.12■□□□□ 0.01
UBL4AP11441 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBL4AP11441 MTHFR-217ENST00000641820 1569 ntBASIC15.12■□□□□ 0.01
UBL4AP11441 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
UBL4AP11441 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBL4AP11441 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBL4AP11441 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UBL4AP11441 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBL4AP11441 AC002056.1-201ENST00000395613 760 ntBASIC15.12■□□□□ 0.01
UBL4AP11441 AC092474.2-201ENST00000424288 719 ntBASIC15.12■□□□□ 0.01
UBL4AP11441 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.12■□□□□ 0.01
UBL4AP11441 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
UBL4AP11441 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
UBL4AP11441 AC112191.1-201ENST00000523689 701 ntBASIC15.12■□□□□ 0.01
UBL4AP11441 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.12■□□□□ 0.01
UBL4AP11441 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
UBL4AP11441 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBL4AP11441 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.12■□□□□ 0.01
UBL4AP11441 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.12■□□□□ 0.01
UBL4AP11441 AL161645.1-201ENST00000622716 1255 ntBASIC15.12■□□□□ 0.01
UBL4AP11441 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.12■□□□□ 0.01
UBL4AP11441 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.12■□□□□ 0.01
UBL4AP11441 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBL4AP11441 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.12■□□□□ 0.01
UBL4AP11441 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.12■□□□□ 0.01
UBL4AP11441 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.12■□□□□ 0.01
UBL4AP11441 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
UBL4AP11441 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.12■□□□□ 0.01
UBL4AP11441 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.12■□□□□ 0.01
UBL4AP11441 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBL4AP11441 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBL4AP11441 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.12■□□□□ 0.01
UBL4AP11441 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBL4AP11441 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UBL4AP11441 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.12■□□□□ 0.01
UBL4AP11441 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UBL4AP11441 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
UBL4AP11441 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.12■□□□□ 0.01
UBL4AP11441 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBL4AP11441 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL4AP11441 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL4AP11441 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL4AP11441 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
UBL4AP11441 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL4AP11441 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
UBL4AP11441 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL4AP11441 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL4AP11441 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL4AP11441 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL4AP11441 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL4AP11441 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL4AP11441 MIR574-201ENST00000385209 96 ntBASIC15.11■□□□□ 0.01
UBL4AP11441 AC023274.1-201ENST00000418278 595 ntBASIC15.11■□□□□ 0.01
UBL4AP11441 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.11■□□□□ 0.01
UBL4AP11441 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms