Protein–RNA interactions for Protein: P0DJI8

SAA1, Serum amyloid A-1 protein, humanhuman

Predicted RBP Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA1P0DJI8 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
SAA1P0DJI8 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.15□□□□□ -0.3
SAA1P0DJI8 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SAA1P0DJI8 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.15□□□□□ -0.3
SAA1P0DJI8 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
SAA1P0DJI8 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
SAA1P0DJI8 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
SAA1P0DJI8 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
SAA1P0DJI8 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.14□□□□□ -0.31
SAA1P0DJI8 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.14□□□□□ -0.31
SAA1P0DJI8 BCAR1-209ENST00000546196 1340 ntBASIC13.14□□□□□ -0.31
SAA1P0DJI8 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SAA1P0DJI8 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
SAA1P0DJI8 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SAA1P0DJI8 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SAA1P0DJI8 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.14□□□□□ -0.31
SAA1P0DJI8 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.14□□□□□ -0.31
SAA1P0DJI8 AC112504.1-201ENST00000623415 1841 ntBASIC13.14□□□□□ -0.31
SAA1P0DJI8 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SAA1P0DJI8 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SAA1P0DJI8 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
SAA1P0DJI8 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.14□□□□□ -0.31
SAA1P0DJI8 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SAA1P0DJI8 AC093724.1-201ENST00000448659 1027 ntBASIC13.14□□□□□ -0.31
SAA1P0DJI8 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.14□□□□□ -0.31
SAA1P0DJI8 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.14□□□□□ -0.31
SAA1P0DJI8 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SAA1P0DJI8 AC145285.3-201ENST00000564603 959 ntBASIC13.14□□□□□ -0.31
SAA1P0DJI8 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.14□□□□□ -0.31
SAA1P0DJI8 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.14□□□□□ -0.31
SAA1P0DJI8 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.14□□□□□ -0.31
SAA1P0DJI8 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.14□□□□□ -0.31
SAA1P0DJI8 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.14□□□□□ -0.31
SAA1P0DJI8 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SAA1P0DJI8 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SAA1P0DJI8 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.14□□□□□ -0.31
SAA1P0DJI8 AC004877.2-201ENST00000623941 599 ntBASIC13.14□□□□□ -0.31
SAA1P0DJI8 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.14□□□□□ -0.31
SAA1P0DJI8 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SAA1P0DJI8 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SAA1P0DJI8 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.14□□□□□ -0.31
SAA1P0DJI8 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
SAA1P0DJI8 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.14□□□□□ -0.31
SAA1P0DJI8 TSPY26P-202ENST00000565928 3884 ntBASIC13.14□□□□□ -0.31
SAA1P0DJI8 AC016027.1-202ENST00000607927 1699 ntBASIC13.14□□□□□ -0.31
SAA1P0DJI8 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SAA1P0DJI8 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
SAA1P0DJI8 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SAA1P0DJI8 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
SAA1P0DJI8 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SAA1P0DJI8 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.14□□□□□ -0.31
SAA1P0DJI8 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SAA1P0DJI8 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
SAA1P0DJI8 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SAA1P0DJI8 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SAA1P0DJI8 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SAA1P0DJI8 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
SAA1P0DJI8 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
SAA1P0DJI8 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SAA1P0DJI8 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.13□□□□□ -0.31
SAA1P0DJI8 AC025580.3-201ENST00000617932 1424 ntBASIC13.13□□□□□ -0.31
SAA1P0DJI8 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.13□□□□□ -0.31
SAA1P0DJI8 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
SAA1P0DJI8 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.13□□□□□ -0.31
SAA1P0DJI8 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.13□□□□□ -0.31
SAA1P0DJI8 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.13□□□□□ -0.31
SAA1P0DJI8 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SAA1P0DJI8 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SAA1P0DJI8 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.13□□□□□ -0.31
SAA1P0DJI8 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SAA1P0DJI8 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SAA1P0DJI8 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SAA1P0DJI8 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SAA1P0DJI8 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SAA1P0DJI8 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SAA1P0DJI8 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.13□□□□□ -0.31
SAA1P0DJI8 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SAA1P0DJI8 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SAA1P0DJI8 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SAA1P0DJI8 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SAA1P0DJI8 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
SAA1P0DJI8 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.13□□□□□ -0.31
SAA1P0DJI8 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SAA1P0DJI8 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.13□□□□□ -0.31
SAA1P0DJI8 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SAA1P0DJI8 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SAA1P0DJI8 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SAA1P0DJI8 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
SAA1P0DJI8 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SAA1P0DJI8 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SAA1P0DJI8 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.13□□□□□ -0.31
SAA1P0DJI8 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SAA1P0DJI8 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SAA1P0DJI8 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.13□□□□□ -0.31
SAA1P0DJI8 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.13□□□□□ -0.31
SAA1P0DJI8 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SAA1P0DJI8 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.13□□□□□ -0.31
SAA1P0DJI8 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.13□□□□□ -0.31
SAA1P0DJI8 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SAA1P0DJI8 AC007967.2-201ENST00000432613 625 ntBASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms