Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.09■□□□□ 0.17
CAPN1P07384 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN1P07384 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.09■□□□□ 0.17
CAPN1P07384 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN1P07384 SNHG9-202ENST00000564014 471 ntBASIC16.09■□□□□ 0.17
CAPN1P07384 AC027796.2-201ENST00000575326 344 ntBASIC16.09■□□□□ 0.17
CAPN1P07384 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.09■□□□□ 0.17
CAPN1P07384 AC091812.2-201ENST00000619081 385 ntBASIC16.09■□□□□ 0.17
CAPN1P07384 AC092902.6-201ENST00000641783 218 ntBASIC16.09■□□□□ 0.17
CAPN1P07384 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN1P07384 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN1P07384 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN1P07384 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN1P07384 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
CAPN1P07384 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN1P07384 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.09■□□□□ 0.17
CAPN1P07384 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN1P07384 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.09■□□□□ 0.17
CAPN1P07384 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN1P07384 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN1P07384 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN1P07384 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
CAPN1P07384 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
CAPN1P07384 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.09■□□□□ 0.17
CAPN1P07384 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CAPN1P07384 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
CAPN1P07384 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CAPN1P07384 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CAPN1P07384 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CAPN1P07384 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.08■□□□□ 0.17
CAPN1P07384 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CAPN1P07384 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CAPN1P07384 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CAPN1P07384 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CAPN1P07384 LINC01144-201ENST00000626198 1710 ntBASIC16.08■□□□□ 0.17
CAPN1P07384 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CAPN1P07384 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CAPN1P07384 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CAPN1P07384 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CAPN1P07384 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CAPN1P07384 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CAPN1P07384 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CAPN1P07384 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.08■□□□□ 0.16
CAPN1P07384 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
CAPN1P07384 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CAPN1P07384 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CAPN1P07384 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CAPN1P07384 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CAPN1P07384 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.08■□□□□ 0.16
CAPN1P07384 CNN2P11-201ENST00000429351 262 ntBASIC16.08■□□□□ 0.16
CAPN1P07384 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CAPN1P07384 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.08■□□□□ 0.16
CAPN1P07384 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.08■□□□□ 0.16
CAPN1P07384 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.08■□□□□ 0.16
CAPN1P07384 AP002472.1-201ENST00000577490 586 ntBASIC16.08■□□□□ 0.16
CAPN1P07384 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.08■□□□□ 0.16
CAPN1P07384 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.08■□□□□ 0.16
CAPN1P07384 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.08■□□□□ 0.16
CAPN1P07384 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.08■□□□□ 0.16
CAPN1P07384 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.08■□□□□ 0.16
CAPN1P07384 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.08■□□□□ 0.16
CAPN1P07384 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CAPN1P07384 KRT18P28-201ENST00000453838 1332 ntBASIC16.08■□□□□ 0.16
CAPN1P07384 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.08■□□□□ 0.16
CAPN1P07384 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CAPN1P07384 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CAPN1P07384 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CAPN1P07384 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.08■□□□□ 0.16
CAPN1P07384 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CAPN1P07384 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CAPN1P07384 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.08■□□□□ 0.16
CAPN1P07384 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CAPN1P07384 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN1P07384 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN1P07384 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.07■□□□□ 0.16
CAPN1P07384 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CAPN1P07384 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.07■□□□□ 0.16
CAPN1P07384 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN1P07384 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN1P07384 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
CAPN1P07384 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN1P07384 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN1P07384 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN1P07384 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN1P07384 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN1P07384 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN1P07384 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN1P07384 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN1P07384 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN1P07384 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.07■□□□□ 0.16
CAPN1P07384 ACTG1P14-201ENST00000446382 1122 ntBASIC16.07■□□□□ 0.16
CAPN1P07384 AL513480.1-201ENST00000451731 511 ntBASIC16.07■□□□□ 0.16
CAPN1P07384 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.07■□□□□ 0.16
CAPN1P07384 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.07■□□□□ 0.16
CAPN1P07384 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.07■□□□□ 0.16
CAPN1P07384 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CAPN1P07384 AC068137.2-201ENST00000605408 478 ntBASIC16.07■□□□□ 0.16
CAPN1P07384 TSPY26P-202ENST00000565928 3884 ntBASIC16.07■□□□□ 0.16
CAPN1P07384 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN1P07384 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms