Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 AL356488.2-201ENST00000602755 427 ntBASIC16.67■□□□□ 0.26
MT-ND3P03897 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
MT-ND3P03897 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
MT-ND3P03897 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MT-ND3P03897 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
MT-ND3P03897 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MT-ND3P03897 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MT-ND3P03897 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MT-ND3P03897 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
MT-ND3P03897 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MT-ND3P03897 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MT-ND3P03897 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MT-ND3P03897 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
MT-ND3P03897 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
MT-ND3P03897 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.67■□□□□ 0.26
MT-ND3P03897 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
MT-ND3P03897 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.67■□□□□ 0.26
MT-ND3P03897 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
MT-ND3P03897 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
MT-ND3P03897 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MT-ND3P03897 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
MT-ND3P03897 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MT-ND3P03897 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
MT-ND3P03897 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
MT-ND3P03897 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MT-ND3P03897 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
MT-ND3P03897 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MT-ND3P03897 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.66■□□□□ 0.26
MT-ND3P03897 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MT-ND3P03897 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MT-ND3P03897 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
MT-ND3P03897 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
MT-ND3P03897 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.66■□□□□ 0.26
MT-ND3P03897 KRT18P3-201ENST00000451602 1288 ntBASIC16.66■□□□□ 0.26
MT-ND3P03897 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
MT-ND3P03897 UNC93B6-202ENST00000528242 690 ntBASIC16.66■□□□□ 0.26
MT-ND3P03897 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
MT-ND3P03897 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
MT-ND3P03897 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.66■□□□□ 0.26
MT-ND3P03897 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.66■□□□□ 0.26
MT-ND3P03897 AC040169.1-201ENST00000565382 521 ntBASIC16.66■□□□□ 0.26
MT-ND3P03897 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
MT-ND3P03897 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.66■□□□□ 0.26
MT-ND3P03897 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MT-ND3P03897 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.66■□□□□ 0.26
MT-ND3P03897 GPAA1P2-202ENST00000606848 1787 ntBASIC16.66■□□□□ 0.26
MT-ND3P03897 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
MT-ND3P03897 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MT-ND3P03897 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.66■□□□□ 0.26
MT-ND3P03897 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MT-ND3P03897 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MT-ND3P03897 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MT-ND3P03897 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MT-ND3P03897 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MT-ND3P03897 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MT-ND3P03897 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.65■□□□□ 0.26
MT-ND3P03897 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
MT-ND3P03897 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MT-ND3P03897 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
MT-ND3P03897 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.65■□□□□ 0.26
MT-ND3P03897 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.65■□□□□ 0.26
MT-ND3P03897 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MT-ND3P03897 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MT-ND3P03897 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
MT-ND3P03897 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
MT-ND3P03897 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
MT-ND3P03897 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MT-ND3P03897 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.65■□□□□ 0.26
MT-ND3P03897 PRAL-201ENST00000624952 3286 ntBASIC16.65■□□□□ 0.26
MT-ND3P03897 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MT-ND3P03897 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
MT-ND3P03897 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
MT-ND3P03897 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MT-ND3P03897 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
MT-ND3P03897 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
MT-ND3P03897 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.65■□□□□ 0.26
MT-ND3P03897 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.65■□□□□ 0.26
MT-ND3P03897 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.65■□□□□ 0.26
MT-ND3P03897 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MT-ND3P03897 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.65■□□□□ 0.26
MT-ND3P03897 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
MT-ND3P03897 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.65■□□□□ 0.26
MT-ND3P03897 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.65■□□□□ 0.26
MT-ND3P03897 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.65■□□□□ 0.26
MT-ND3P03897 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.65■□□□□ 0.26
MT-ND3P03897 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.65■□□□□ 0.26
MT-ND3P03897 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.65■□□□□ 0.26
MT-ND3P03897 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.65■□□□□ 0.26
MT-ND3P03897 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MT-ND3P03897 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.65■□□□□ 0.26
MT-ND3P03897 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.65■□□□□ 0.26
MT-ND3P03897 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
MT-ND3P03897 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.65■□□□□ 0.26
MT-ND3P03897 AP002414.3-201ENST00000589352 1468 ntBASIC16.65■□□□□ 0.26
MT-ND3P03897 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MT-ND3P03897 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MT-ND3P03897 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.65■□□□□ 0.26
MT-ND3P03897 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
MT-ND3P03897 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
MT-ND3P03897 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms