Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA1P02708 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA1P02708 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA1P02708 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA1P02708 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
CHRNA1P02708 AC074338.1-201ENST00000416825 156 ntBASIC17.55■□□□□ 0.4
CHRNA1P02708 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA1P02708 RPL13P2-201ENST00000440687 659 ntBASIC17.55■□□□□ 0.4
CHRNA1P02708 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.55■□□□□ 0.4
CHRNA1P02708 AC007389.4-201ENST00000454674 793 ntBASIC17.55■□□□□ 0.4
CHRNA1P02708 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CHRNA1P02708 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.55■□□□□ 0.4
CHRNA1P02708 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CHRNA1P02708 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.55■□□□□ 0.4
CHRNA1P02708 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.55■□□□□ 0.4
CHRNA1P02708 MIR4259-201ENST00000584466 101 ntBASIC17.55■□□□□ 0.4
CHRNA1P02708 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.55■□□□□ 0.4
CHRNA1P02708 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA1P02708 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA1P02708 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CHRNA1P02708 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.55■□□□□ 0.4
CHRNA1P02708 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA1P02708 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.55■□□□□ 0.4
CHRNA1P02708 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA1P02708 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.55■□□□□ 0.4
CHRNA1P02708 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA1P02708 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA1P02708 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA1P02708 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA1P02708 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
CHRNA1P02708 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.54■□□□□ 0.4
CHRNA1P02708 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA1P02708 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.54■□□□□ 0.4
CHRNA1P02708 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.54■□□□□ 0.4
CHRNA1P02708 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA1P02708 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
CHRNA1P02708 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA1P02708 AC005052.1-201ENST00000625181 2492 ntBASIC17.54■□□□□ 0.4
CHRNA1P02708 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
CHRNA1P02708 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA1P02708 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA1P02708 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CHRNA1P02708 AC245100.5-201ENST00000452108 331 ntBASIC17.54■□□□□ 0.4
CHRNA1P02708 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.54■□□□□ 0.4
CHRNA1P02708 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.54■□□□□ 0.4
CHRNA1P02708 AC104596.2-201ENST00000512793 793 ntBASIC17.54■□□□□ 0.4
CHRNA1P02708 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.54■□□□□ 0.4
CHRNA1P02708 AC243562.2-201ENST00000561247 970 ntBASIC17.54■□□□□ 0.4
CHRNA1P02708 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.54■□□□□ 0.4
CHRNA1P02708 AC008735.3-201ENST00000596646 500 ntBASIC17.54■□□□□ 0.4
CHRNA1P02708 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.54■□□□□ 0.4
CHRNA1P02708 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA1P02708 RPSAP52-203ENST00000622976 1023 ntBASIC17.54■□□□□ 0.4
CHRNA1P02708 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.54■□□□□ 0.4
CHRNA1P02708 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA1P02708 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.54■□□□□ 0.4
CHRNA1P02708 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.54■□□□□ 0.4
CHRNA1P02708 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA1P02708 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
CHRNA1P02708 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA1P02708 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA1P02708 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CHRNA1P02708 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.54■□□□□ 0.4
CHRNA1P02708 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CHRNA1P02708 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.53■□□□□ 0.4
CHRNA1P02708 BNIP3P1-202ENST00000550043 1585 ntBASIC17.53■□□□□ 0.4
CHRNA1P02708 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CHRNA1P02708 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA1P02708 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA1P02708 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA1P02708 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CHRNA1P02708 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA1P02708 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA1P02708 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA1P02708 REXO1L8P-201ENST00000604378 1897 ntBASIC17.53■□□□□ 0.4
CHRNA1P02708 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA1P02708 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA1P02708 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA1P02708 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.53■□□□□ 0.4
CHRNA1P02708 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.53■□□□□ 0.4
CHRNA1P02708 AC119751.2-201ENST00000504529 210 ntBASIC17.53■□□□□ 0.4
CHRNA1P02708 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.53■□□□□ 0.4
CHRNA1P02708 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.53■□□□□ 0.4
CHRNA1P02708 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA1P02708 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.53■□□□□ 0.4
CHRNA1P02708 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.53■□□□□ 0.4
CHRNA1P02708 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CHRNA1P02708 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA1P02708 AL158212.4-201ENST00000624062 1286 ntBASIC17.53■□□□□ 0.4
CHRNA1P02708 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.53■□□□□ 0.4
CHRNA1P02708 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CHRNA1P02708 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA1P02708 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CHRNA1P02708 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA1P02708 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.53■□□□□ 0.4
CHRNA1P02708 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA1P02708 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.53■□□□□ 0.4
CHRNA1P02708 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CHRNA1P02708 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNA1P02708 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms