Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
KRT6AP02538 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
KRT6AP02538 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.83■□□□□ 0.13
KRT6AP02538 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
KRT6AP02538 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
KRT6AP02538 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
KRT6AP02538 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.83■□□□□ 0.13
KRT6AP02538 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
KRT6AP02538 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
KRT6AP02538 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRT6AP02538 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.83■□□□□ 0.12
KRT6AP02538 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRT6AP02538 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
KRT6AP02538 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
KRT6AP02538 PAUPAR-201ENST00000630360 2965 ntBASIC15.83■□□□□ 0.12
KRT6AP02538 LINC00554-201ENST00000564841 3011 ntBASIC15.83■□□□□ 0.12
KRT6AP02538 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.83■□□□□ 0.12
KRT6AP02538 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
KRT6AP02538 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
KRT6AP02538 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
KRT6AP02538 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRT6AP02538 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.83■□□□□ 0.12
KRT6AP02538 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
KRT6AP02538 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRT6AP02538 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.83■□□□□ 0.12
KRT6AP02538 RHOQP3-201ENST00000437982 621 ntBASIC15.83■□□□□ 0.12
KRT6AP02538 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
KRT6AP02538 AC079776.4-201ENST00000511039 504 ntBASIC15.83■□□□□ 0.12
KRT6AP02538 RNA5SP419-201ENST00000515908 135 ntBASIC15.83■□□□□ 0.12
KRT6AP02538 AC109635.5-201ENST00000533593 962 ntBASIC15.83■□□□□ 0.12
KRT6AP02538 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.83■□□□□ 0.12
KRT6AP02538 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.83■□□□□ 0.12
KRT6AP02538 AC023141.13-201ENST00000604991 943 ntBASIC15.83■□□□□ 0.12
KRT6AP02538 AC010507.1-201ENST00000633895 436 ntBASIC15.83■□□□□ 0.12
KRT6AP02538 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
KRT6AP02538 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
KRT6AP02538 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRT6AP02538 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRT6AP02538 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
KRT6AP02538 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRT6AP02538 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
KRT6AP02538 TCAF2P1-201ENST00000291129 2421 ntBASIC15.83■□□□□ 0.12
KRT6AP02538 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.83■□□□□ 0.12
KRT6AP02538 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRT6AP02538 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6AP02538 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.82■□□□□ 0.12
KRT6AP02538 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6AP02538 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6AP02538 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6AP02538 LINC02447-202ENST00000501888 2146 ntBASIC15.82■□□□□ 0.12
KRT6AP02538 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6AP02538 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6AP02538 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.82■□□□□ 0.12
KRT6AP02538 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6AP02538 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6AP02538 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.82■□□□□ 0.12
KRT6AP02538 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6AP02538 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.82■□□□□ 0.12
KRT6AP02538 KRT18P34-201ENST00000488218 1270 ntBASIC15.82■□□□□ 0.12
KRT6AP02538 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.82■□□□□ 0.12
KRT6AP02538 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.82■□□□□ 0.12
KRT6AP02538 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.82■□□□□ 0.12
KRT6AP02538 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.82■□□□□ 0.12
KRT6AP02538 AL009183.1-201ENST00000603760 355 ntBASIC15.82■□□□□ 0.12
KRT6AP02538 Z83851.2-201ENST00000609564 659 ntBASIC15.82■□□□□ 0.12
KRT6AP02538 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6AP02538 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6AP02538 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6AP02538 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6AP02538 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6AP02538 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6AP02538 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6AP02538 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6AP02538 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6AP02538 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.82■□□□□ 0.12
KRT6AP02538 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.82■□□□□ 0.12
KRT6AP02538 CDC14C-201ENST00000428251 1719 ntBASIC15.82■□□□□ 0.12
KRT6AP02538 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.82■□□□□ 0.12
KRT6AP02538 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.82■□□□□ 0.12
KRT6AP02538 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6AP02538 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6AP02538 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6AP02538 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6AP02538 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6AP02538 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6AP02538 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6AP02538 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6AP02538 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6AP02538 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6AP02538 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6AP02538 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6AP02538 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6AP02538 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6AP02538 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
KRT6AP02538 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6AP02538 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6AP02538 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.81■□□□□ 0.12
KRT6AP02538 TPM4P1-201ENST00000436100 807 ntBASIC15.81■□□□□ 0.12
KRT6AP02538 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6AP02538 AC105917.1-201ENST00000506637 2539 ntBASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms