Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRUB2O95900 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRUB2O95900 AC007950.2-201ENST00000615045 2347 ntBASIC17.04■□□□□ 0.32
TRUB2O95900 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
TRUB2O95900 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRUB2O95900 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TRUB2O95900 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRUB2O95900 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TRUB2O95900 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRUB2O95900 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRUB2O95900 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRUB2O95900 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRUB2O95900 AL139400.1-201ENST00000366220 510 ntBASIC17.04■□□□□ 0.32
TRUB2O95900 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRUB2O95900 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.04■□□□□ 0.32
TRUB2O95900 TSEN15P1-201ENST00000423257 515 ntBASIC17.04■□□□□ 0.32
TRUB2O95900 RBPMS2P1-201ENST00000437762 623 ntBASIC17.04■□□□□ 0.32
TRUB2O95900 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TRUB2O95900 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.04■□□□□ 0.32
TRUB2O95900 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.04■□□□□ 0.32
TRUB2O95900 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.04■□□□□ 0.32
TRUB2O95900 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRUB2O95900 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRUB2O95900 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRUB2O95900 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
TRUB2O95900 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRUB2O95900 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRUB2O95900 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRUB2O95900 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRUB2O95900 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRUB2O95900 AC010491.1-201ENST00000563101 2797 ntBASIC17.04■□□□□ 0.32
TRUB2O95900 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
TRUB2O95900 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
TRUB2O95900 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRUB2O95900 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRUB2O95900 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRUB2O95900 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRUB2O95900 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRUB2O95900 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.03■□□□□ 0.32
TRUB2O95900 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRUB2O95900 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRUB2O95900 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRUB2O95900 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRUB2O95900 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.03■□□□□ 0.32
TRUB2O95900 MIR648-201ENST00000385046 94 ntBASIC17.03■□□□□ 0.32
TRUB2O95900 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRUB2O95900 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRUB2O95900 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.03■□□□□ 0.32
TRUB2O95900 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.03■□□□□ 0.32
TRUB2O95900 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.03■□□□□ 0.32
TRUB2O95900 HLA-J-203ENST00000494367 1087 ntBASIC17.03■□□□□ 0.32
TRUB2O95900 ALG1L8P-201ENST00000533887 760 ntBASIC17.03■□□□□ 0.32
TRUB2O95900 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRUB2O95900 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.03■□□□□ 0.32
TRUB2O95900 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRUB2O95900 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRUB2O95900 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRUB2O95900 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRUB2O95900 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.03■□□□□ 0.32
TRUB2O95900 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRUB2O95900 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRUB2O95900 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.03■□□□□ 0.32
TRUB2O95900 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRUB2O95900 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRUB2O95900 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TRUB2O95900 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TRUB2O95900 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRUB2O95900 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.02■□□□□ 0.32
TRUB2O95900 AP3S2-216ENST00000617003 1561 ntBASIC17.02■□□□□ 0.32
TRUB2O95900 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TRUB2O95900 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRUB2O95900 CDC14C-201ENST00000428251 1719 ntBASIC17.02■□□□□ 0.32
TRUB2O95900 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRUB2O95900 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TRUB2O95900 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRUB2O95900 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRUB2O95900 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRUB2O95900 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRUB2O95900 FAM220BP-201ENST00000377689 816 ntBASIC17.02■□□□□ 0.32
TRUB2O95900 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
TRUB2O95900 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.02■□□□□ 0.32
TRUB2O95900 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRUB2O95900 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
TRUB2O95900 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.02■□□□□ 0.32
TRUB2O95900 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.02■□□□□ 0.32
TRUB2O95900 AC092183.1-201ENST00000469884 875 ntBASIC17.02■□□□□ 0.32
TRUB2O95900 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.02■□□□□ 0.32
TRUB2O95900 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.02■□□□□ 0.32
TRUB2O95900 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRUB2O95900 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.02■□□□□ 0.32
TRUB2O95900 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.02■□□□□ 0.32
TRUB2O95900 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
TRUB2O95900 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.02■□□□□ 0.32
TRUB2O95900 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.02■□□□□ 0.32
TRUB2O95900 LINC00628-201ENST00000628516 1289 ntBASIC17.02■□□□□ 0.32
TRUB2O95900 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
TRUB2O95900 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.02■□□□□ 0.31
TRUB2O95900 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRUB2O95900 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRUB2O95900 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms