Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CNOT4O95628 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CNOT4O95628 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CNOT4O95628 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CNOT4O95628 C8orf49-201ENST00000525043 1968 ntBASIC14.51□□□□□ -0.09
CNOT4O95628 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.51□□□□□ -0.09
CNOT4O95628 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.51□□□□□ -0.09
CNOT4O95628 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
CNOT4O95628 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CNOT4O95628 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CNOT4O95628 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CNOT4O95628 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CNOT4O95628 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.51□□□□□ -0.09
CNOT4O95628 AC067863.1-201ENST00000494933 530 ntBASIC14.51□□□□□ -0.09
CNOT4O95628 AC109322.1-201ENST00000524499 1264 ntBASIC14.51□□□□□ -0.09
CNOT4O95628 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CNOT4O95628 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.51□□□□□ -0.09
CNOT4O95628 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.51□□□□□ -0.09
CNOT4O95628 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.51□□□□□ -0.09
CNOT4O95628 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.51□□□□□ -0.09
CNOT4O95628 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.51□□□□□ -0.09
CNOT4O95628 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CNOT4O95628 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CNOT4O95628 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CNOT4O95628 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CNOT4O95628 CICP6-201ENST00000457191 2729 ntBASIC14.51□□□□□ -0.09
CNOT4O95628 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CNOT4O95628 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CNOT4O95628 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.51□□□□□ -0.09
CNOT4O95628 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CNOT4O95628 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CNOT4O95628 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CNOT4O95628 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CNOT4O95628 AC079328.2-201ENST00000561241 3354 ntBASIC14.51□□□□□ -0.09
CNOT4O95628 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CNOT4O95628 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CNOT4O95628 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CNOT4O95628 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CNOT4O95628 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CNOT4O95628 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.51□□□□□ -0.09
CNOT4O95628 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CNOT4O95628 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CNOT4O95628 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CNOT4O95628 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.5□□□□□ -0.09
CNOT4O95628 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CNOT4O95628 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CNOT4O95628 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.5□□□□□ -0.09
CNOT4O95628 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CNOT4O95628 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CNOT4O95628 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.5□□□□□ -0.09
CNOT4O95628 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CNOT4O95628 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.5□□□□□ -0.09
CNOT4O95628 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CNOT4O95628 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.5□□□□□ -0.09
CNOT4O95628 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.5□□□□□ -0.09
CNOT4O95628 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.5□□□□□ -0.09
CNOT4O95628 AC005498.2-205ENST00000593218 784 ntBASIC14.5□□□□□ -0.09
CNOT4O95628 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.5□□□□□ -0.09
CNOT4O95628 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.5□□□□□ -0.09
CNOT4O95628 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.5□□□□□ -0.09
CNOT4O95628 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CNOT4O95628 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.5□□□□□ -0.09
CNOT4O95628 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CNOT4O95628 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
CNOT4O95628 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CNOT4O95628 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CNOT4O95628 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.5□□□□□ -0.09
CNOT4O95628 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CNOT4O95628 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CNOT4O95628 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CNOT4O95628 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CNOT4O95628 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
CNOT4O95628 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CNOT4O95628 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CNOT4O95628 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CNOT4O95628 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CNOT4O95628 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CNOT4O95628 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
CNOT4O95628 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CNOT4O95628 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CNOT4O95628 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CNOT4O95628 GGT3P-204ENST00000453783 1664 ntBASIC14.49□□□□□ -0.09
CNOT4O95628 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
CNOT4O95628 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CNOT4O95628 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CNOT4O95628 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CNOT4O95628 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CNOT4O95628 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CNOT4O95628 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.49□□□□□ -0.09
CNOT4O95628 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
CNOT4O95628 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CNOT4O95628 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CNOT4O95628 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CNOT4O95628 PCGF3-213ENST00000620529 1899 ntBASIC14.49□□□□□ -0.09
CNOT4O95628 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CNOT4O95628 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CNOT4O95628 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.49□□□□□ -0.09
CNOT4O95628 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CNOT4O95628 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CNOT4O95628 HLA-H-201ENST00000383620 1096 ntBASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms