Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GFRA3O60609 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GFRA3O60609 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.59■□□□□ 0.09
GFRA3O60609 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GFRA3O60609 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
GFRA3O60609 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
GFRA3O60609 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.59■□□□□ 0.09
GFRA3O60609 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.59■□□□□ 0.09
GFRA3O60609 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GFRA3O60609 CYP4F24P-201ENST00000586049 1580 ntBASIC15.59■□□□□ 0.09
GFRA3O60609 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GFRA3O60609 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.59■□□□□ 0.09
GFRA3O60609 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC15.59■□□□□ 0.09
GFRA3O60609 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.59■□□□□ 0.09
GFRA3O60609 CTBP2P4-201ENST00000513884 920 ntBASIC15.59■□□□□ 0.09
GFRA3O60609 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.59■□□□□ 0.09
GFRA3O60609 AC025181.2-201ENST00000606994 802 ntBASIC15.59■□□□□ 0.09
GFRA3O60609 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC15.59■□□□□ 0.09
GFRA3O60609 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC15.59■□□□□ 0.09
GFRA3O60609 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.59■□□□□ 0.09
GFRA3O60609 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GFRA3O60609 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.59■□□□□ 0.09
GFRA3O60609 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GFRA3O60609 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
GFRA3O60609 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GFRA3O60609 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GFRA3O60609 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GFRA3O60609 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GFRA3O60609 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GFRA3O60609 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GFRA3O60609 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GFRA3O60609 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.09
GFRA3O60609 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
GFRA3O60609 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
GFRA3O60609 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.58■□□□□ 0.09
GFRA3O60609 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
GFRA3O60609 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.58■□□□□ 0.09
GFRA3O60609 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GFRA3O60609 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GFRA3O60609 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GFRA3O60609 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.58■□□□□ 0.08
GFRA3O60609 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC15.58■□□□□ 0.08
GFRA3O60609 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
GFRA3O60609 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GFRA3O60609 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.58■□□□□ 0.08
GFRA3O60609 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.58■□□□□ 0.08
GFRA3O60609 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GFRA3O60609 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
GFRA3O60609 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
GFRA3O60609 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.58■□□□□ 0.08
GFRA3O60609 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.58■□□□□ 0.08
GFRA3O60609 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC15.58■□□□□ 0.08
GFRA3O60609 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
GFRA3O60609 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC15.58■□□□□ 0.08
GFRA3O60609 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.58■□□□□ 0.08
GFRA3O60609 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GFRA3O60609 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
GFRA3O60609 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GFRA3O60609 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GFRA3O60609 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
GFRA3O60609 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
GFRA3O60609 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC15.58■□□□□ 0.08
GFRA3O60609 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15.58■□□□□ 0.08
GFRA3O60609 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
GFRA3O60609 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GFRA3O60609 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GFRA3O60609 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
GFRA3O60609 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GFRA3O60609 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.58■□□□□ 0.08
GFRA3O60609 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
GFRA3O60609 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GFRA3O60609 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GFRA3O60609 AC108860.2-201ENST00000562760 2183 ntBASIC15.58■□□□□ 0.08
GFRA3O60609 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GFRA3O60609 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
GFRA3O60609 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GFRA3O60609 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
GFRA3O60609 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
GFRA3O60609 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GFRA3O60609 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
GFRA3O60609 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GFRA3O60609 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
GFRA3O60609 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
GFRA3O60609 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
GFRA3O60609 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC15.57■□□□□ 0.08
GFRA3O60609 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC15.57■□□□□ 0.08
GFRA3O60609 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC15.57■□□□□ 0.08
GFRA3O60609 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC15.57■□□□□ 0.08
GFRA3O60609 AC012618.1-201ENST00000461223 412 ntBASIC15.57■□□□□ 0.08
GFRA3O60609 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GFRA3O60609 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC15.57■□□□□ 0.08
GFRA3O60609 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
GFRA3O60609 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GFRA3O60609 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC15.57■□□□□ 0.08
GFRA3O60609 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.57■□□□□ 0.08
GFRA3O60609 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.57■□□□□ 0.08
GFRA3O60609 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.57■□□□□ 0.08
GFRA3O60609 CENPX-208ENST00000584347 799 ntTSL 2 BASIC15.57■□□□□ 0.08
GFRA3O60609 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.57■□□□□ 0.08
GFRA3O60609 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms