Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
SMARCA5O60264 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC20.08■□□□□ 0.8
SMARCA5O60264 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SMARCA5O60264 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SMARCA5O60264 AC069224.1-201ENST00000566372 1715 ntBASIC20.07■□□□□ 0.8
SMARCA5O60264 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SMARCA5O60264 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMARCA5O60264 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SMARCA5O60264 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SMARCA5O60264 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC20.07■□□□□ 0.8
SMARCA5O60264 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC20.07■□□□□ 0.8
SMARCA5O60264 PRAL-201ENST00000624952 3286 ntBASIC20.07■□□□□ 0.8
SMARCA5O60264 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
SMARCA5O60264 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMARCA5O60264 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC20.07■□□□□ 0.8
SMARCA5O60264 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SMARCA5O60264 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC20.07■□□□□ 0.8
SMARCA5O60264 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SMARCA5O60264 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SMARCA5O60264 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SMARCA5O60264 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC20.07■□□□□ 0.8
SMARCA5O60264 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SMARCA5O60264 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SMARCA5O60264 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC20.07■□□□□ 0.8
SMARCA5O60264 AC005237.2-201ENST00000434368 219 ntBASIC20.07■□□□□ 0.8
SMARCA5O60264 AC098859.1-201ENST00000502915 1238 ntBASIC20.07■□□□□ 0.8
SMARCA5O60264 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC20.07■□□□□ 0.8
SMARCA5O60264 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC20.07■□□□□ 0.8
SMARCA5O60264 AC023511.2-201ENST00000618803 211 ntBASIC20.07■□□□□ 0.8
SMARCA5O60264 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMARCA5O60264 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SMARCA5O60264 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SMARCA5O60264 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SMARCA5O60264 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC20.07■□□□□ 0.8
SMARCA5O60264 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC20.07■□□□□ 0.8
SMARCA5O60264 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SMARCA5O60264 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC20.06■□□□□ 0.8
SMARCA5O60264 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMARCA5O60264 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMARCA5O60264 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SMARCA5O60264 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMARCA5O60264 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMARCA5O60264 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMARCA5O60264 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMARCA5O60264 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC20.06■□□□□ 0.8
SMARCA5O60264 KRT18P13-201ENST00000400056 1290 ntBASIC20.06■□□□□ 0.8
SMARCA5O60264 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC20.06■□□□□ 0.8
SMARCA5O60264 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SMARCA5O60264 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SMARCA5O60264 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC20.06■□□□□ 0.8
SMARCA5O60264 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC20.06■□□□□ 0.8
SMARCA5O60264 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC20.06■□□□□ 0.8
SMARCA5O60264 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SMARCA5O60264 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMARCA5O60264 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMARCA5O60264 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20.06■□□□□ 0.8
SMARCA5O60264 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC20.06■□□□□ 0.8
SMARCA5O60264 AC061975.2-201ENST00000581722 295 ntBASIC20.06■□□□□ 0.8
SMARCA5O60264 AL596442.2-201ENST00000610240 980 ntBASIC20.06■□□□□ 0.8
SMARCA5O60264 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC20.06■□□□□ 0.8
SMARCA5O60264 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SMARCA5O60264 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC20.06■□□□□ 0.8
SMARCA5O60264 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMARCA5O60264 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC20.06■□□□□ 0.8
SMARCA5O60264 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMARCA5O60264 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMARCA5O60264 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SMARCA5O60264 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMARCA5O60264 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC20.06■□□□□ 0.8
SMARCA5O60264 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMARCA5O60264 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SMARCA5O60264 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMARCA5O60264 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC20.06■□□□□ 0.8
SMARCA5O60264 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMARCA5O60264 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMARCA5O60264 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC20.05■□□□□ 0.8
SMARCA5O60264 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
SMARCA5O60264 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMARCA5O60264 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMARCA5O60264 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMARCA5O60264 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMARCA5O60264 AC008677.1-201ENST00000519230 1561 ntBASIC20.05■□□□□ 0.8
SMARCA5O60264 AP3S2-216ENST00000617003 1561 ntBASIC20.05■□□□□ 0.8
SMARCA5O60264 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SMARCA5O60264 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SMARCA5O60264 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMARCA5O60264 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SMARCA5O60264 AL627223.1-201ENST00000416693 442 ntBASIC20.05■□□□□ 0.8
SMARCA5O60264 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.05■□□□□ 0.8
SMARCA5O60264 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC20.05■□□□□ 0.8
SMARCA5O60264 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC20.05■□□□□ 0.8
SMARCA5O60264 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC20.05■□□□□ 0.8
SMARCA5O60264 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMARCA5O60264 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMARCA5O60264 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SMARCA5O60264 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMARCA5O60264 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SMARCA5O60264 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMARCA5O60264 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC20.04■□□□□ 0.8
SMARCA5O60264 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms