Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
TVP23AA6NH52 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.6□□□□□ -0.07
TVP23AA6NH52 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TVP23AA6NH52 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TVP23AA6NH52 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
TVP23AA6NH52 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.6□□□□□ -0.07
TVP23AA6NH52 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.6□□□□□ -0.07
TVP23AA6NH52 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.6□□□□□ -0.07
TVP23AA6NH52 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
TVP23AA6NH52 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TVP23AA6NH52 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TVP23AA6NH52 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TVP23AA6NH52 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.6□□□□□ -0.07
TVP23AA6NH52 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TVP23AA6NH52 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TVP23AA6NH52 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TVP23AA6NH52 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TVP23AA6NH52 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.6□□□□□ -0.07
TVP23AA6NH52 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.6□□□□□ -0.07
TVP23AA6NH52 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.6□□□□□ -0.07
TVP23AA6NH52 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TVP23AA6NH52 AL513480.1-201ENST00000451731 511 ntBASIC14.6□□□□□ -0.07
TVP23AA6NH52 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.6□□□□□ -0.07
TVP23AA6NH52 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.6□□□□□ -0.07
TVP23AA6NH52 RN7SL510P-201ENST00000581311 263 ntBASIC14.6□□□□□ -0.07
TVP23AA6NH52 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TVP23AA6NH52 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
TVP23AA6NH52 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.6□□□□□ -0.07
TVP23AA6NH52 AL031055.1-201ENST00000606362 631 ntBASIC14.6□□□□□ -0.07
TVP23AA6NH52 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.6□□□□□ -0.07
TVP23AA6NH52 AL031008.1-201ENST00000619963 541 ntBASIC14.6□□□□□ -0.07
TVP23AA6NH52 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TVP23AA6NH52 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TVP23AA6NH52 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TVP23AA6NH52 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
TVP23AA6NH52 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.6□□□□□ -0.07
TVP23AA6NH52 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TVP23AA6NH52 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TVP23AA6NH52 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TVP23AA6NH52 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TVP23AA6NH52 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TVP23AA6NH52 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TVP23AA6NH52 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TVP23AA6NH52 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TVP23AA6NH52 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TVP23AA6NH52 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TVP23AA6NH52 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TVP23AA6NH52 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TVP23AA6NH52 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.6□□□□□ -0.07
TVP23AA6NH52 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TVP23AA6NH52 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.59□□□□□ -0.07
TVP23AA6NH52 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TVP23AA6NH52 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TVP23AA6NH52 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TVP23AA6NH52 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TVP23AA6NH52 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TVP23AA6NH52 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TVP23AA6NH52 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TVP23AA6NH52 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.59□□□□□ -0.07
TVP23AA6NH52 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TVP23AA6NH52 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TVP23AA6NH52 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.59□□□□□ -0.07
TVP23AA6NH52 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
TVP23AA6NH52 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TVP23AA6NH52 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TVP23AA6NH52 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TVP23AA6NH52 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.59□□□□□ -0.07
TVP23AA6NH52 RNU1-129P-201ENST00000384064 167 ntBASIC14.59□□□□□ -0.07
TVP23AA6NH52 AC098831.1-202ENST00000438821 336 ntBASIC14.59□□□□□ -0.07
TVP23AA6NH52 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TVP23AA6NH52 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.59□□□□□ -0.07
TVP23AA6NH52 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.59□□□□□ -0.07
TVP23AA6NH52 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.59□□□□□ -0.07
TVP23AA6NH52 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
TVP23AA6NH52 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TVP23AA6NH52 AL160237.2-201ENST00000556165 472 ntBASIC14.59□□□□□ -0.07
TVP23AA6NH52 U1.21-201ENST00000580816 167 ntBASIC14.59□□□□□ -0.07
TVP23AA6NH52 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TVP23AA6NH52 MIR7706-201ENST00000613747 67 ntBASIC14.59□□□□□ -0.07
TVP23AA6NH52 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TVP23AA6NH52 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.59□□□□□ -0.07
TVP23AA6NH52 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
TVP23AA6NH52 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.59□□□□□ -0.07
TVP23AA6NH52 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
TVP23AA6NH52 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TVP23AA6NH52 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TVP23AA6NH52 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TVP23AA6NH52 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.59□□□□□ -0.07
TVP23AA6NH52 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TVP23AA6NH52 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.59□□□□□ -0.07
TVP23AA6NH52 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TVP23AA6NH52 MIR600HG-201ENST00000449175 5984 ntBASIC14.59□□□□□ -0.07
TVP23AA6NH52 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TVP23AA6NH52 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TVP23AA6NH52 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.07
TVP23AA6NH52 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
TVP23AA6NH52 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
TVP23AA6NH52 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
TVP23AA6NH52 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.58□□□□□ -0.08
TVP23AA6NH52 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms