Protein–RNA interactions for Protein: A6NGH7

CCDC160, Coiled-coil domain-containing protein 160, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC160A6NGH7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC160A6NGH7 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC160A6NGH7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC160A6NGH7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.16■□□□□ 0.02
CCDC160A6NGH7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC160A6NGH7 AC239809.2-201ENST00000415381 517 ntBASIC15.16■□□□□ 0.02
CCDC160A6NGH7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC15.16■□□□□ 0.02
CCDC160A6NGH7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC15.16■□□□□ 0.02
CCDC160A6NGH7 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.16■□□□□ 0.02
CCDC160A6NGH7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC15.16■□□□□ 0.02
CCDC160A6NGH7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.16■□□□□ 0.02
CCDC160A6NGH7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.16■□□□□ 0.02
CCDC160A6NGH7 SLC25A1P4-201ENST00000567977 778 ntBASIC15.16■□□□□ 0.02
CCDC160A6NGH7 AL023875.1-201ENST00000640777 796 ntBASIC15.16■□□□□ 0.02
CCDC160A6NGH7 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC160A6NGH7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.16■□□□□ 0.02
CCDC160A6NGH7 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC160A6NGH7 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
CCDC160A6NGH7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CCDC160A6NGH7 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC160A6NGH7 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC160A6NGH7 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC15.16■□□□□ 0.02
CCDC160A6NGH7 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CCDC160A6NGH7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CCDC160A6NGH7 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC160A6NGH7 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CCDC160A6NGH7 AL671710.1-201ENST00000610245 2349 ntBASIC15.16■□□□□ 0.02
CCDC160A6NGH7 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC15.16■□□□□ 0.02
CCDC160A6NGH7 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC160A6NGH7 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.16■□□□□ 0.02
CCDC160A6NGH7 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC160A6NGH7 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC15.16■□□□□ 0.02
CCDC160A6NGH7 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CCDC160A6NGH7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC160A6NGH7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC160A6NGH7 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC160A6NGH7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC160A6NGH7 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CCDC160A6NGH7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC15.16■□□□□ 0.02
CCDC160A6NGH7 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC160A6NGH7 TP73-211ENST00000604074 4806 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC160A6NGH7 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC160A6NGH7 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC160A6NGH7 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC160A6NGH7 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC160A6NGH7 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC160A6NGH7 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC160A6NGH7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC160A6NGH7 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC160A6NGH7 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC160A6NGH7 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC160A6NGH7 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC160A6NGH7 AC096733.2-201ENST00000609937 1394 ntBASIC15.15■□□□□ 0.02
CCDC160A6NGH7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC160A6NGH7 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CCDC160A6NGH7 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CCDC160A6NGH7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC160A6NGH7 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC160A6NGH7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC160A6NGH7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CCDC160A6NGH7 PPP1R14BP2-201ENST00000426284 444 ntBASIC15.15■□□□□ 0.02
CCDC160A6NGH7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC160A6NGH7 WWOX-216ENST00000569818 525 ntBASIC15.15■□□□□ 0.02
CCDC160A6NGH7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
CCDC160A6NGH7 MTDHP1-201ENST00000605323 784 ntBASIC15.15■□□□□ 0.02
CCDC160A6NGH7 AL353708.3-201ENST00000610272 989 ntBASIC15.15■□□□□ 0.02
CCDC160A6NGH7 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CCDC160A6NGH7 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC160A6NGH7 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC160A6NGH7 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC160A6NGH7 AC013726.1-201ENST00000563747 2285 ntBASIC15.15■□□□□ 0.02
CCDC160A6NGH7 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC160A6NGH7 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC160A6NGH7 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC160A6NGH7 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CCDC160A6NGH7 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC160A6NGH7 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC160A6NGH7 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC160A6NGH7 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC160A6NGH7 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC160A6NGH7 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC160A6NGH7 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC160A6NGH7 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC160A6NGH7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC160A6NGH7 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CCDC160A6NGH7 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC160A6NGH7 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC160A6NGH7 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CCDC160A6NGH7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC160A6NGH7 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
CCDC160A6NGH7 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC160A6NGH7 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC160A6NGH7 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CCDC160A6NGH7 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
CCDC160A6NGH7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC160A6NGH7 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC160A6NGH7 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC160A6NGH7 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC160A6NGH7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC160A6NGH7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms