Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA6Q9Y5G7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
PCDHGA6Q9Y5G7 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA6Q9Y5G7 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA6Q9Y5G7 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.74■□□□□ 0.11
PCDHGA6Q9Y5G7 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.74■□□□□ 0.11
PCDHGA6Q9Y5G7 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHGA6Q9Y5G7 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.74■□□□□ 0.11
PCDHGA6Q9Y5G7 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.74■□□□□ 0.11
PCDHGA6Q9Y5G7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA6Q9Y5G7 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PCDHGA6Q9Y5G7 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
PCDHGA6Q9Y5G7 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA6Q9Y5G7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA6Q9Y5G7 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
PCDHGA6Q9Y5G7 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHGA6Q9Y5G7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA6Q9Y5G7 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PCDHGA6Q9Y5G7 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA6Q9Y5G7 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
PCDHGA6Q9Y5G7 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA6Q9Y5G7 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA6Q9Y5G7 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PCDHGA6Q9Y5G7 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 PAUPAR-201ENST00000630360 2965 ntBASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 AC190387.1-201ENST00000551683 408 ntBASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 AL158211.3-201ENST00000607385 239 ntBASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 FRMD8P1-201ENST00000440433 1524 ntBASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA6Q9Y5G7 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA6Q9Y5G7 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA6Q9Y5G7 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGA6Q9Y5G7 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA6Q9Y5G7 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PCDHGA6Q9Y5G7 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGA6Q9Y5G7 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA6Q9Y5G7 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDHGA6Q9Y5G7 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PCDHGA6Q9Y5G7 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA6Q9Y5G7 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA6Q9Y5G7 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA6Q9Y5G7 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA6Q9Y5G7 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGA6Q9Y5G7 AC008677.1-201ENST00000519230 1561 ntBASIC15.72■□□□□ 0.11
PCDHGA6Q9Y5G7 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.72■□□□□ 0.11
PCDHGA6Q9Y5G7 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA6Q9Y5G7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA6Q9Y5G7 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA6Q9Y5G7 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA6Q9Y5G7 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGA6Q9Y5G7 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA6Q9Y5G7 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA6Q9Y5G7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms