Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 FRMD8P1-201ENST00000440433 1524 ntBASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 CETN4P-206ENST00000642099 2168 ntBASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 PKD1P1-201ENST00000458669 6805 ntBASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.25■□□□□ 0.03
PCDHGA9Q9Y5G4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 KRT17P7-201ENST00000451704 1104 ntBASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 MIR6752-201ENST00000618442 71 ntBASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PCDHGA9Q9Y5G4 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 PCDHB17P-201ENST00000539533 2393 ntBASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms