Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
AP4S1Q9Y587 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
AP4S1Q9Y587 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
AP4S1Q9Y587 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP4S1Q9Y587 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.46■□□□□ 0.07
AP4S1Q9Y587 PCDHA3-202ENST00000532566 4594 ntBASIC15.46■□□□□ 0.07
AP4S1Q9Y587 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.46■□□□□ 0.07
AP4S1Q9Y587 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.46■□□□□ 0.07
AP4S1Q9Y587 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP4S1Q9Y587 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
AP4S1Q9Y587 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
AP4S1Q9Y587 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP4S1Q9Y587 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.46■□□□□ 0.07
AP4S1Q9Y587 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.46■□□□□ 0.07
AP4S1Q9Y587 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
AP4S1Q9Y587 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.46■□□□□ 0.07
AP4S1Q9Y587 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP4S1Q9Y587 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.46■□□□□ 0.07
AP4S1Q9Y587 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP4S1Q9Y587 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.46■□□□□ 0.07
AP4S1Q9Y587 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP4S1Q9Y587 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.46■□□□□ 0.07
AP4S1Q9Y587 BX664615.1-201ENST00000443558 458 ntBASIC15.46■□□□□ 0.07
AP4S1Q9Y587 HOMER2P1-201ENST00000455653 964 ntBASIC15.46■□□□□ 0.07
AP4S1Q9Y587 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
AP4S1Q9Y587 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP4S1Q9Y587 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.46■□□□□ 0.07
AP4S1Q9Y587 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
AP4S1Q9Y587 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP4S1Q9Y587 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP4S1Q9Y587 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.46■□□□□ 0.07
AP4S1Q9Y587 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
AP4S1Q9Y587 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
AP4S1Q9Y587 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP4S1Q9Y587 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
AP4S1Q9Y587 LINC01101-201ENST00000622953 1884 ntBASIC15.46■□□□□ 0.06
AP4S1Q9Y587 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
AP4S1Q9Y587 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
AP4S1Q9Y587 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
AP4S1Q9Y587 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.46■□□□□ 0.06
AP4S1Q9Y587 TP73-AS1-210ENST00000637775 1455 ntBASIC15.46■□□□□ 0.06
AP4S1Q9Y587 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.46■□□□□ 0.06
AP4S1Q9Y587 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
AP4S1Q9Y587 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 MIR4497-201ENST00000583208 89 ntBASIC15.45■□□□□ 0.06
AP4S1Q9Y587 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 AC145285.6-201ENST00000604632 637 ntBASIC15.45■□□□□ 0.06
AP4S1Q9Y587 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 AC005089.1-201ENST00000619486 2241 ntBASIC15.45■□□□□ 0.06
AP4S1Q9Y587 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.45■□□□□ 0.06
AP4S1Q9Y587 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
AP4S1Q9Y587 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
AP4S1Q9Y587 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms