Protein–RNA interactions for Protein: Q9NUN5

LMBRD1, Probable lysosomal cobalamin transporter, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMBRD1Q9NUN5 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
LMBRD1Q9NUN5 ELK2BP-201ENST00000415014 1224 ntBASIC18.71■□□□□ 0.59
LMBRD1Q9NUN5 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.71■□□□□ 0.59
LMBRD1Q9NUN5 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.71■□□□□ 0.59
LMBRD1Q9NUN5 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.71■□□□□ 0.59
LMBRD1Q9NUN5 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LMBRD1Q9NUN5 KRT16P4-201ENST00000453883 522 ntBASIC18.71■□□□□ 0.59
LMBRD1Q9NUN5 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.71■□□□□ 0.59
LMBRD1Q9NUN5 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LMBRD1Q9NUN5 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.71■□□□□ 0.59
LMBRD1Q9NUN5 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.71■□□□□ 0.59
LMBRD1Q9NUN5 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
LMBRD1Q9NUN5 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LMBRD1Q9NUN5 NPAP1P7-201ENST00000613027 823 ntBASIC18.71■□□□□ 0.59
LMBRD1Q9NUN5 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
LMBRD1Q9NUN5 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LMBRD1Q9NUN5 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LMBRD1Q9NUN5 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
LMBRD1Q9NUN5 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LMBRD1Q9NUN5 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.71■□□□□ 0.59
LMBRD1Q9NUN5 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LMBRD1Q9NUN5 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LMBRD1Q9NUN5 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LMBRD1Q9NUN5 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LMBRD1Q9NUN5 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.71■□□□□ 0.59
LMBRD1Q9NUN5 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LMBRD1Q9NUN5 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LMBRD1Q9NUN5 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LMBRD1Q9NUN5 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LMBRD1Q9NUN5 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.71■□□□□ 0.59
LMBRD1Q9NUN5 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.71■□□□□ 0.59
LMBRD1Q9NUN5 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.71■□□□□ 0.58
LMBRD1Q9NUN5 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
LMBRD1Q9NUN5 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
LMBRD1Q9NUN5 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.7■□□□□ 0.58
LMBRD1Q9NUN5 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LMBRD1Q9NUN5 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.7■□□□□ 0.58
LMBRD1Q9NUN5 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LMBRD1Q9NUN5 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC18.7■□□□□ 0.58
LMBRD1Q9NUN5 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LMBRD1Q9NUN5 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.7■□□□□ 0.58
LMBRD1Q9NUN5 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LMBRD1Q9NUN5 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.7■□□□□ 0.58
LMBRD1Q9NUN5 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LMBRD1Q9NUN5 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LMBRD1Q9NUN5 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.7■□□□□ 0.58
LMBRD1Q9NUN5 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.7■□□□□ 0.58
LMBRD1Q9NUN5 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC18.7■□□□□ 0.58
LMBRD1Q9NUN5 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.7■□□□□ 0.58
LMBRD1Q9NUN5 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.7■□□□□ 0.58
LMBRD1Q9NUN5 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LMBRD1Q9NUN5 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
LMBRD1Q9NUN5 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
LMBRD1Q9NUN5 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LMBRD1Q9NUN5 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LMBRD1Q9NUN5 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
LMBRD1Q9NUN5 AC129492.6-201ENST00000611383 1305 ntBASIC18.7■□□□□ 0.58
LMBRD1Q9NUN5 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
LMBRD1Q9NUN5 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
LMBRD1Q9NUN5 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
LMBRD1Q9NUN5 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LMBRD1Q9NUN5 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
LMBRD1Q9NUN5 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.7■□□□□ 0.58
LMBRD1Q9NUN5 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LMBRD1Q9NUN5 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LMBRD1Q9NUN5 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.69■□□□□ 0.58
LMBRD1Q9NUN5 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
LMBRD1Q9NUN5 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LMBRD1Q9NUN5 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC18.69■□□□□ 0.58
LMBRD1Q9NUN5 PARN-202ENST00000420015 2360 ntTSL 2 BASIC18.69■□□□□ 0.58
LMBRD1Q9NUN5 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LMBRD1Q9NUN5 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC18.69■□□□□ 0.58
LMBRD1Q9NUN5 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LMBRD1Q9NUN5 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LMBRD1Q9NUN5 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC18.69■□□□□ 0.58
LMBRD1Q9NUN5 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC18.69■□□□□ 0.58
LMBRD1Q9NUN5 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
LMBRD1Q9NUN5 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LMBRD1Q9NUN5 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LMBRD1Q9NUN5 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.69■□□□□ 0.58
LMBRD1Q9NUN5 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.69■□□□□ 0.58
LMBRD1Q9NUN5 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.69■□□□□ 0.58
LMBRD1Q9NUN5 SART3-203ENST00000546611 1184 ntBASIC18.69■□□□□ 0.58
LMBRD1Q9NUN5 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.69■□□□□ 0.58
LMBRD1Q9NUN5 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LMBRD1Q9NUN5 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.69■□□□□ 0.58
LMBRD1Q9NUN5 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
LMBRD1Q9NUN5 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LMBRD1Q9NUN5 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LMBRD1Q9NUN5 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
LMBRD1Q9NUN5 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LMBRD1Q9NUN5 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
LMBRD1Q9NUN5 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LMBRD1Q9NUN5 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LMBRD1Q9NUN5 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
LMBRD1Q9NUN5 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LMBRD1Q9NUN5 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LMBRD1Q9NUN5 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.69■□□□□ 0.58
LMBRD1Q9NUN5 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LMBRD1Q9NUN5 AC007191.1-201ENST00000623179 2995 ntBASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms