Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
GCM1Q9NP62 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
GCM1Q9NP62 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
GCM1Q9NP62 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
GCM1Q9NP62 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.97□□□□□ -0.17
GCM1Q9NP62 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.97□□□□□ -0.17
GCM1Q9NP62 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.97□□□□□ -0.17
GCM1Q9NP62 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.97□□□□□ -0.17
GCM1Q9NP62 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.97□□□□□ -0.17
GCM1Q9NP62 AL596442.2-201ENST00000610240 980 ntBASIC13.97□□□□□ -0.17
GCM1Q9NP62 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.97□□□□□ -0.17
GCM1Q9NP62 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
GCM1Q9NP62 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.97□□□□□ -0.17
GCM1Q9NP62 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GCM1Q9NP62 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GCM1Q9NP62 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GCM1Q9NP62 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GCM1Q9NP62 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GCM1Q9NP62 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GCM1Q9NP62 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
GCM1Q9NP62 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
GCM1Q9NP62 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GCM1Q9NP62 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GCM1Q9NP62 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GCM1Q9NP62 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GCM1Q9NP62 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
GCM1Q9NP62 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.96□□□□□ -0.17
GCM1Q9NP62 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GCM1Q9NP62 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.96□□□□□ -0.17
GCM1Q9NP62 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GCM1Q9NP62 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GCM1Q9NP62 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.96□□□□□ -0.17
GCM1Q9NP62 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.96□□□□□ -0.17
GCM1Q9NP62 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
GCM1Q9NP62 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.96□□□□□ -0.17
GCM1Q9NP62 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GCM1Q9NP62 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.96□□□□□ -0.17
GCM1Q9NP62 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
GCM1Q9NP62 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GCM1Q9NP62 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.96□□□□□ -0.17
GCM1Q9NP62 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GCM1Q9NP62 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GCM1Q9NP62 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
GCM1Q9NP62 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GCM1Q9NP62 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GCM1Q9NP62 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.96□□□□□ -0.17
GCM1Q9NP62 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GCM1Q9NP62 AC018695.7-201ENST00000624587 2492 ntBASIC13.96□□□□□ -0.17
GCM1Q9NP62 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GCM1Q9NP62 PCGF3-213ENST00000620529 1899 ntBASIC13.96□□□□□ -0.17
GCM1Q9NP62 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.96□□□□□ -0.17
GCM1Q9NP62 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.96□□□□□ -0.17
GCM1Q9NP62 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GCM1Q9NP62 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GCM1Q9NP62 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GCM1Q9NP62 AC004461.1-201ENST00000412461 403 ntBASIC13.96□□□□□ -0.17
GCM1Q9NP62 CNN2P11-201ENST00000429351 262 ntBASIC13.96□□□□□ -0.17
GCM1Q9NP62 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.96□□□□□ -0.17
GCM1Q9NP62 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GCM1Q9NP62 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
GCM1Q9NP62 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.96□□□□□ -0.17
GCM1Q9NP62 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.96□□□□□ -0.17
GCM1Q9NP62 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GCM1Q9NP62 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
GCM1Q9NP62 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
GCM1Q9NP62 AC004835.2-201ENST00000603762 682 ntBASIC13.96□□□□□ -0.17
GCM1Q9NP62 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GCM1Q9NP62 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GCM1Q9NP62 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
GCM1Q9NP62 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GCM1Q9NP62 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
GCM1Q9NP62 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
GCM1Q9NP62 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
GCM1Q9NP62 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
GCM1Q9NP62 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
GCM1Q9NP62 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.96□□□□□ -0.18
GCM1Q9NP62 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
GCM1Q9NP62 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
GCM1Q9NP62 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.95□□□□□ -0.18
GCM1Q9NP62 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.95□□□□□ -0.18
GCM1Q9NP62 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GCM1Q9NP62 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
GCM1Q9NP62 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GCM1Q9NP62 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
GCM1Q9NP62 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GCM1Q9NP62 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GCM1Q9NP62 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
GCM1Q9NP62 AL118508.1-201ENST00000613502 2345 ntBASIC13.95□□□□□ -0.18
GCM1Q9NP62 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
GCM1Q9NP62 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GCM1Q9NP62 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GCM1Q9NP62 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GCM1Q9NP62 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
GCM1Q9NP62 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
GCM1Q9NP62 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.95□□□□□ -0.18
GCM1Q9NP62 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.95□□□□□ -0.18
GCM1Q9NP62 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.95□□□□□ -0.18
GCM1Q9NP62 SPCS2P4-201ENST00000436160 681 ntBASIC13.95□□□□□ -0.18
GCM1Q9NP62 AL592309.1-201ENST00000443127 649 ntBASIC13.95□□□□□ -0.18
GCM1Q9NP62 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms