Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
BRF2Q9HAW0 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
BRF2Q9HAW0 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.58■□□□□ 0.08
BRF2Q9HAW0 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
BRF2Q9HAW0 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.58■□□□□ 0.08
BRF2Q9HAW0 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.58■□□□□ 0.08
BRF2Q9HAW0 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
BRF2Q9HAW0 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.58■□□□□ 0.08
BRF2Q9HAW0 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.58■□□□□ 0.08
BRF2Q9HAW0 AC105233.2-201ENST00000523697 349 ntBASIC15.58■□□□□ 0.08
BRF2Q9HAW0 AF228730.5-201ENST00000530288 346 ntBASIC15.58■□□□□ 0.08
BRF2Q9HAW0 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.58■□□□□ 0.08
BRF2Q9HAW0 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.58■□□□□ 0.08
BRF2Q9HAW0 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
BRF2Q9HAW0 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
BRF2Q9HAW0 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.58■□□□□ 0.08
BRF2Q9HAW0 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
BRF2Q9HAW0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.58■□□□□ 0.08
BRF2Q9HAW0 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
BRF2Q9HAW0 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.58■□□□□ 0.08
BRF2Q9HAW0 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
BRF2Q9HAW0 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
BRF2Q9HAW0 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 AC098859.1-201ENST00000502915 1238 ntBASIC15.57■□□□□ 0.08
BRF2Q9HAW0 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 FAM86C2P-203ENST00000528684 1004 ntBASIC15.57■□□□□ 0.08
BRF2Q9HAW0 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRF2Q9HAW0 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
BRF2Q9HAW0 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
BRF2Q9HAW0 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BRF2Q9HAW0 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.56■□□□□ 0.08
BRF2Q9HAW0 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BRF2Q9HAW0 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.56■□□□□ 0.08
BRF2Q9HAW0 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
BRF2Q9HAW0 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.56■□□□□ 0.08
BRF2Q9HAW0 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
BRF2Q9HAW0 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
BRF2Q9HAW0 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
BRF2Q9HAW0 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BRF2Q9HAW0 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
BRF2Q9HAW0 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
BRF2Q9HAW0 AL355306.1-201ENST00000415580 579 ntBASIC15.56■□□□□ 0.08
BRF2Q9HAW0 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.56■□□□□ 0.08
BRF2Q9HAW0 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.56■□□□□ 0.08
BRF2Q9HAW0 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.56■□□□□ 0.08
BRF2Q9HAW0 AC040169.1-201ENST00000565382 521 ntBASIC15.56■□□□□ 0.08
BRF2Q9HAW0 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.56■□□□□ 0.08
BRF2Q9HAW0 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BRF2Q9HAW0 AC091812.2-201ENST00000619081 385 ntBASIC15.56■□□□□ 0.08
BRF2Q9HAW0 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
BRF2Q9HAW0 AP001282.1-201ENST00000531301 1499 ntBASIC15.56■□□□□ 0.08
BRF2Q9HAW0 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
BRF2Q9HAW0 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
BRF2Q9HAW0 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
BRF2Q9HAW0 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
BRF2Q9HAW0 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms