Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.5■□□□□ 0.39
NXF3Q9H4D5 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NXF3Q9H4D5 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.49■□□□□ 0.39
NXF3Q9H4D5 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.49■□□□□ 0.39
NXF3Q9H4D5 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NXF3Q9H4D5 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NXF3Q9H4D5 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.49■□□□□ 0.39
NXF3Q9H4D5 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NXF3Q9H4D5 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NXF3Q9H4D5 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NXF3Q9H4D5 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NXF3Q9H4D5 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NXF3Q9H4D5 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
NXF3Q9H4D5 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NXF3Q9H4D5 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NXF3Q9H4D5 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NXF3Q9H4D5 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NXF3Q9H4D5 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.49■□□□□ 0.39
NXF3Q9H4D5 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.49■□□□□ 0.39
NXF3Q9H4D5 HIST3H2BA-201ENST00000436555 524 ntBASIC17.49■□□□□ 0.39
NXF3Q9H4D5 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.49■□□□□ 0.39
NXF3Q9H4D5 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.49■□□□□ 0.39
NXF3Q9H4D5 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.49■□□□□ 0.39
NXF3Q9H4D5 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.49■□□□□ 0.39
NXF3Q9H4D5 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NXF3Q9H4D5 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.49■□□□□ 0.39
NXF3Q9H4D5 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NXF3Q9H4D5 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NXF3Q9H4D5 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.49■□□□□ 0.39
NXF3Q9H4D5 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.49■□□□□ 0.39
NXF3Q9H4D5 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NXF3Q9H4D5 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.49■□□□□ 0.39
NXF3Q9H4D5 AL132655.2-201ENST00000596276 594 ntBASIC17.49■□□□□ 0.39
NXF3Q9H4D5 AC012645.4-201ENST00000610691 1061 ntBASIC17.49■□□□□ 0.39
NXF3Q9H4D5 AL109936.8-201ENST00000641772 604 ntBASIC17.49■□□□□ 0.39
NXF3Q9H4D5 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
NXF3Q9H4D5 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.49■□□□□ 0.39
NXF3Q9H4D5 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
NXF3Q9H4D5 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.49■□□□□ 0.39
NXF3Q9H4D5 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NXF3Q9H4D5 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.49■□□□□ 0.39
NXF3Q9H4D5 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
NXF3Q9H4D5 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.48■□□□□ 0.39
NXF3Q9H4D5 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NXF3Q9H4D5 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.48■□□□□ 0.39
NXF3Q9H4D5 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NXF3Q9H4D5 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
NXF3Q9H4D5 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NXF3Q9H4D5 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.48■□□□□ 0.39
NXF3Q9H4D5 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.48■□□□□ 0.39
NXF3Q9H4D5 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NXF3Q9H4D5 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NXF3Q9H4D5 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NXF3Q9H4D5 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
NXF3Q9H4D5 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NXF3Q9H4D5 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.48■□□□□ 0.39
NXF3Q9H4D5 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.48■□□□□ 0.39
NXF3Q9H4D5 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.48■□□□□ 0.39
NXF3Q9H4D5 AC114501.2-201ENST00000439631 535 ntBASIC17.48■□□□□ 0.39
NXF3Q9H4D5 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.48■□□□□ 0.39
NXF3Q9H4D5 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.48■□□□□ 0.39
NXF3Q9H4D5 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
NXF3Q9H4D5 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
NXF3Q9H4D5 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
NXF3Q9H4D5 MIR6069-201ENST00000620069 79 ntBASIC17.48■□□□□ 0.39
NXF3Q9H4D5 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NXF3Q9H4D5 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
NXF3Q9H4D5 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NXF3Q9H4D5 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NXF3Q9H4D5 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NXF3Q9H4D5 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NXF3Q9H4D5 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NXF3Q9H4D5 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NXF3Q9H4D5 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms