Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.56■□□□□ 0.72
RTFDC1Q9BY42 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTFDC1Q9BY42 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RTFDC1Q9BY42 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTFDC1Q9BY42 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTFDC1Q9BY42 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTFDC1Q9BY42 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTFDC1Q9BY42 KRT8P44-201ENST00000441609 1350 ntBASIC19.56■□□□□ 0.72
RTFDC1Q9BY42 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC19.56■□□□□ 0.72
RTFDC1Q9BY42 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTFDC1Q9BY42 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RTFDC1Q9BY42 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTFDC1Q9BY42 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTFDC1Q9BY42 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RTFDC1Q9BY42 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RTFDC1Q9BY42 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTFDC1Q9BY42 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RTFDC1Q9BY42 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTFDC1Q9BY42 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTFDC1Q9BY42 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTFDC1Q9BY42 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RTFDC1Q9BY42 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC19.55■□□□□ 0.72
RTFDC1Q9BY42 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTFDC1Q9BY42 RPL7P3-201ENST00000441388 714 ntBASIC19.55■□□□□ 0.72
RTFDC1Q9BY42 TARDBPP1-201ENST00000442013 1203 ntBASIC19.55■□□□□ 0.72
RTFDC1Q9BY42 KRT8P37-201ENST00000451609 1420 ntBASIC19.55■□□□□ 0.72
RTFDC1Q9BY42 AC124283.3-201ENST00000570869 594 ntBASIC19.55■□□□□ 0.72
RTFDC1Q9BY42 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC19.55■□□□□ 0.72
RTFDC1Q9BY42 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC19.55■□□□□ 0.72
RTFDC1Q9BY42 LETM1P2-201ENST00000597330 2178 ntBASIC19.55■□□□□ 0.72
RTFDC1Q9BY42 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC19.55■□□□□ 0.72
RTFDC1Q9BY42 GPR182-203ENST00000622922 591 ntBASIC19.55■□□□□ 0.72
RTFDC1Q9BY42 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTFDC1Q9BY42 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTFDC1Q9BY42 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTFDC1Q9BY42 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RTFDC1Q9BY42 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC19.55■□□□□ 0.72
RTFDC1Q9BY42 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTFDC1Q9BY42 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTFDC1Q9BY42 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTFDC1Q9BY42 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RTFDC1Q9BY42 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RTFDC1Q9BY42 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTFDC1Q9BY42 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
RTFDC1Q9BY42 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTFDC1Q9BY42 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTFDC1Q9BY42 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTFDC1Q9BY42 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTFDC1Q9BY42 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.54■□□□□ 0.72
RTFDC1Q9BY42 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.54■□□□□ 0.72
RTFDC1Q9BY42 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
RTFDC1Q9BY42 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RTFDC1Q9BY42 GZMB-202ENST00000382540 816 ntTSL 5 BASIC19.54■□□□□ 0.72
RTFDC1Q9BY42 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC19.54■□□□□ 0.72
RTFDC1Q9BY42 ELP6-209ENST00000446787 894 ntTSL 3 BASIC19.54■□□□□ 0.72
RTFDC1Q9BY42 AC245100.5-201ENST00000452108 331 ntBASIC19.54■□□□□ 0.72
RTFDC1Q9BY42 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC19.54■□□□□ 0.72
RTFDC1Q9BY42 CD74-212ENST00000524315 584 ntTSL 5 BASIC19.54■□□□□ 0.72
RTFDC1Q9BY42 AP001889.1-201ENST00000525414 633 ntBASIC19.54■□□□□ 0.72
RTFDC1Q9BY42 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC19.54■□□□□ 0.72
RTFDC1Q9BY42 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
RTFDC1Q9BY42 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTFDC1Q9BY42 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTFDC1Q9BY42 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTFDC1Q9BY42 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
RTFDC1Q9BY42 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTFDC1Q9BY42 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
RTFDC1Q9BY42 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
RTFDC1Q9BY42 TP73-213ENST00000604479 1623 ntTSL 5 BASIC19.54■□□□□ 0.72
RTFDC1Q9BY42 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTFDC1Q9BY42 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RTFDC1Q9BY42 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RTFDC1Q9BY42 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RTFDC1Q9BY42 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RTFDC1Q9BY42 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTFDC1Q9BY42 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTFDC1Q9BY42 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTFDC1Q9BY42 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTFDC1Q9BY42 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTFDC1Q9BY42 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RTFDC1Q9BY42 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RTFDC1Q9BY42 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTFDC1Q9BY42 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.53■□□□□ 0.72
RTFDC1Q9BY42 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTFDC1Q9BY42 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTFDC1Q9BY42 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.53■□□□□ 0.72
RTFDC1Q9BY42 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.53■□□□□ 0.72
RTFDC1Q9BY42 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTFDC1Q9BY42 PKIG-203ENST00000372887 769 ntTSL 3 BASIC19.53■□□□□ 0.72
RTFDC1Q9BY42 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RTFDC1Q9BY42 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC19.53■□□□□ 0.72
RTFDC1Q9BY42 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC19.53■□□□□ 0.72
RTFDC1Q9BY42 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC19.53■□□□□ 0.72
RTFDC1Q9BY42 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC19.53■□□□□ 0.72
RTFDC1Q9BY42 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTFDC1Q9BY42 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC19.53■□□□□ 0.72
RTFDC1Q9BY42 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.53■□□□□ 0.72
RTFDC1Q9BY42 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
RTFDC1Q9BY42 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RTFDC1Q9BY42 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms