Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 AC012618.2-201ENST00000428058 849 ntBASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 ZNF444P1-201ENST00000559497 298 ntBASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SEC22CQ9BRL7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC13.83□□□□□ -0.19
SEC22CQ9BRL7 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SEC22CQ9BRL7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SEC22CQ9BRL7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
SEC22CQ9BRL7 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SEC22CQ9BRL7 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SEC22CQ9BRL7 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
SEC22CQ9BRL7 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SEC22CQ9BRL7 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 ECEL1P3-201ENST00000427961 737 ntBASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 NUS1P1-201ENST00000446295 882 ntBASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 FAM87A-204ENST00000613235 858 ntBASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 AC117489.1-201ENST00000625169 3217 ntBASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 AC005252.3-201ENST00000623855 2258 ntBASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC13.83□□□□□ -0.2
SEC22CQ9BRL7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC13.82□□□□□ -0.2
SEC22CQ9BRL7 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SEC22CQ9BRL7 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SEC22CQ9BRL7 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.82□□□□□ -0.2
SEC22CQ9BRL7 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.82□□□□□ -0.2
SEC22CQ9BRL7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC13.82□□□□□ -0.2
SEC22CQ9BRL7 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
SEC22CQ9BRL7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.82□□□□□ -0.2
SEC22CQ9BRL7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms