Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 REXO1L8P-201ENST00000604378 1897 ntBASIC16.86■□□□□ 0.29
CDK5RAP1Q96SZ6 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK5RAP1Q96SZ6 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK5RAP1Q96SZ6 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.86■□□□□ 0.29
CDK5RAP1Q96SZ6 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.86■□□□□ 0.29
CDK5RAP1Q96SZ6 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.86■□□□□ 0.29
CDK5RAP1Q96SZ6 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.86■□□□□ 0.29
CDK5RAP1Q96SZ6 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.86■□□□□ 0.29
CDK5RAP1Q96SZ6 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.86■□□□□ 0.29
CDK5RAP1Q96SZ6 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CDK5RAP1Q96SZ6 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK5RAP1Q96SZ6 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CDK5RAP1Q96SZ6 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK5RAP1Q96SZ6 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.86■□□□□ 0.29
CDK5RAP1Q96SZ6 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CDK5RAP1Q96SZ6 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK5RAP1Q96SZ6 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.86■□□□□ 0.29
CDK5RAP1Q96SZ6 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.86■□□□□ 0.29
CDK5RAP1Q96SZ6 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK5RAP1Q96SZ6 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK5RAP1Q96SZ6 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK5RAP1Q96SZ6 AC087499.5-201ENST00000452760 1342 ntBASIC16.86■□□□□ 0.29
CDK5RAP1Q96SZ6 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK5RAP1Q96SZ6 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CDK5RAP1Q96SZ6 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK5RAP1Q96SZ6 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CDK5RAP1Q96SZ6 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.86■□□□□ 0.29
CDK5RAP1Q96SZ6 KRT8P12-202ENST00000472924 1397 ntBASIC16.86■□□□□ 0.29
CDK5RAP1Q96SZ6 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.86■□□□□ 0.29
CDK5RAP1Q96SZ6 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK5RAP1Q96SZ6 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK5RAP1Q96SZ6 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK5RAP1Q96SZ6 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CDK5RAP1Q96SZ6 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK5RAP1Q96SZ6 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 AC011676.5-201ENST00000624864 2660 ntBASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 RPL37AP1-201ENST00000412502 279 ntBASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 AL080243.2-201ENST00000418783 582 ntBASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 AC243562.2-201ENST00000561247 970 ntBASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 MIR3197-201ENST00000582241 73 ntBASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 ALOX12P2-203ENST00000570921 1945 ntBASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 AL391005.1-201ENST00000623953 2435 ntBASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.85■□□□□ 0.29
CDK5RAP1Q96SZ6 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.84■□□□□ 0.29
CDK5RAP1Q96SZ6 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP1Q96SZ6 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CDK5RAP1Q96SZ6 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.84■□□□□ 0.29
CDK5RAP1Q96SZ6 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP1Q96SZ6 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP1Q96SZ6 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP1Q96SZ6 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP1Q96SZ6 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP1Q96SZ6 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.84■□□□□ 0.29
CDK5RAP1Q96SZ6 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.84■□□□□ 0.29
CDK5RAP1Q96SZ6 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP1Q96SZ6 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CDK5RAP1Q96SZ6 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP1Q96SZ6 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.84■□□□□ 0.29
CDK5RAP1Q96SZ6 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP1Q96SZ6 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP1Q96SZ6 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms