Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.41■□□□□ 0.06
NR1H4Q96RI1 TSPY15P-201ENST00000457163 923 ntBASIC15.41■□□□□ 0.06
NR1H4Q96RI1 AC128688.1-201ENST00000487626 519 ntBASIC15.41■□□□□ 0.06
NR1H4Q96RI1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 AC024243.1-201ENST00000609234 778 ntBASIC15.41■□□□□ 0.06
NR1H4Q96RI1 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 CYP2D8P-201ENST00000433633 1490 ntBASIC15.4■□□□□ 0.06
NR1H4Q96RI1 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.4■□□□□ 0.06
NR1H4Q96RI1 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 TSPY14P-201ENST00000303979 915 ntBASIC15.4■□□□□ 0.06
NR1H4Q96RI1 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 AC010653.2-201ENST00000623505 997 ntBASIC15.4■□□□□ 0.06
NR1H4Q96RI1 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 GLDC-219ENST00000640208 420 ntTSL 2 BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 AC091951.1-201ENST00000512854 2465 ntBASIC15.4■□□□□ 0.06
NR1H4Q96RI1 AC010460.3-201ENST00000511359 1579 ntBASIC15.4■□□□□ 0.06
NR1H4Q96RI1 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H4Q96RI1 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
NR1H4Q96RI1 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 AGAP7P-201ENST00000582299 2062 ntBASIC15.39■□□□□ 0.05
NR1H4Q96RI1 AGAP14-201ENST00000624701 2060 ntBASIC15.39■□□□□ 0.05
NR1H4Q96RI1 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 EGLN1P1-201ENST00000531623 762 ntBASIC15.39■□□□□ 0.05
NR1H4Q96RI1 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 NAPSB-206ENST00000562112 1266 ntBASIC15.39■□□□□ 0.05
NR1H4Q96RI1 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms