Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
MS4A4EQ96PG1 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 AL589702.1-201ENST00000641229 1509 ntBASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 MIR574-201ENST00000385209 96 ntBASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 MCCD1P2-201ENST00000423228 335 ntBASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 POLD2P1-201ENST00000511220 997 ntBASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 FAM86C2P-203ENST00000528684 1004 ntBASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 AL135744.1-201ENST00000565098 629 ntBASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 LINC02447-202ENST00000501888 2146 ntBASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
MS4A4EQ96PG1 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
MS4A4EQ96PG1 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MS4A4EQ96PG1 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
MS4A4EQ96PG1 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
MS4A4EQ96PG1 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.21■□□□□ 0.03
MS4A4EQ96PG1 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.21■□□□□ 0.03
MS4A4EQ96PG1 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MS4A4EQ96PG1 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MS4A4EQ96PG1 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MS4A4EQ96PG1 CDC14C-201ENST00000428251 1719 ntBASIC15.21■□□□□ 0.03
MS4A4EQ96PG1 AC069224.1-201ENST00000566372 1715 ntBASIC15.21■□□□□ 0.03
MS4A4EQ96PG1 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MS4A4EQ96PG1 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
MS4A4EQ96PG1 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MS4A4EQ96PG1 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
MS4A4EQ96PG1 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MS4A4EQ96PG1 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MS4A4EQ96PG1 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.21■□□□□ 0.03
MS4A4EQ96PG1 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.21■□□□□ 0.03
MS4A4EQ96PG1 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.21■□□□□ 0.03
MS4A4EQ96PG1 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.21■□□□□ 0.03
MS4A4EQ96PG1 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.21■□□□□ 0.03
MS4A4EQ96PG1 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MS4A4EQ96PG1 PGAM5P1-201ENST00000518923 814 ntBASIC15.21■□□□□ 0.03
MS4A4EQ96PG1 AC105233.2-201ENST00000523697 349 ntBASIC15.21■□□□□ 0.03
MS4A4EQ96PG1 AF228730.5-201ENST00000530288 346 ntBASIC15.21■□□□□ 0.03
MS4A4EQ96PG1 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
MS4A4EQ96PG1 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
MS4A4EQ96PG1 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MS4A4EQ96PG1 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
MS4A4EQ96PG1 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MS4A4EQ96PG1 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MS4A4EQ96PG1 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.02
MS4A4EQ96PG1 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
MS4A4EQ96PG1 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
MS4A4EQ96PG1 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.21■□□□□ 0.02
MS4A4EQ96PG1 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
MS4A4EQ96PG1 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms