Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
AP3S1Q92572 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S1Q92572 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S1Q92572 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S1Q92572 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
AP3S1Q92572 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.41□□□□□ -0.1
AP3S1Q92572 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.41□□□□□ -0.1
AP3S1Q92572 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S1Q92572 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S1Q92572 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S1Q92572 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S1Q92572 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
AP3S1Q92572 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
AP3S1Q92572 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S1Q92572 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S1Q92572 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.41□□□□□ -0.1
AP3S1Q92572 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S1Q92572 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
AP3S1Q92572 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S1Q92572 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S1Q92572 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S1Q92572 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
AP3S1Q92572 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S1Q92572 STARP1-201ENST00000397973 869 ntBASIC14.41□□□□□ -0.1
AP3S1Q92572 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.41□□□□□ -0.1
AP3S1Q92572 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
AP3S1Q92572 SPDYE15P-201ENST00000424157 909 ntBASIC14.41□□□□□ -0.1
AP3S1Q92572 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.41□□□□□ -0.1
AP3S1Q92572 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.41□□□□□ -0.1
AP3S1Q92572 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
AP3S1Q92572 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S1Q92572 AL023973.1-201ENST00000624619 620 ntBASIC14.41□□□□□ -0.1
AP3S1Q92572 AC243591.1-201ENST00000452967 1364 ntBASIC14.41□□□□□ -0.1
AP3S1Q92572 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.41□□□□□ -0.1
AP3S1Q92572 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.41□□□□□ -0.1
AP3S1Q92572 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.41□□□□□ -0.1
AP3S1Q92572 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.41□□□□□ -0.1
AP3S1Q92572 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S1Q92572 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.41□□□□□ -0.1
AP3S1Q92572 AP003680.1-201ENST00000598970 3660 ntBASIC14.41□□□□□ -0.1
AP3S1Q92572 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S1Q92572 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
AP3S1Q92572 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S1Q92572 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.41□□□□□ -0.1
AP3S1Q92572 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.41□□□□□ -0.1
AP3S1Q92572 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S1Q92572 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S1Q92572 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.41□□□□□ -0.1
AP3S1Q92572 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S1Q92572 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S1Q92572 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S1Q92572 Z83836.1-201ENST00000624605 1642 ntBASIC14.41□□□□□ -0.1
AP3S1Q92572 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S1Q92572 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
AP3S1Q92572 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S1Q92572 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
AP3S1Q92572 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S1Q92572 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S1Q92572 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S1Q92572 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S1Q92572 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S1Q92572 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.4□□□□□ -0.1
AP3S1Q92572 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S1Q92572 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.4□□□□□ -0.1
AP3S1Q92572 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
AP3S1Q92572 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S1Q92572 LINC00528-201ENST00000600723 2160 ntBASIC14.4□□□□□ -0.1
AP3S1Q92572 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S1Q92572 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S1Q92572 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S1Q92572 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.4□□□□□ -0.1
AP3S1Q92572 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.4□□□□□ -0.1
AP3S1Q92572 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.4□□□□□ -0.1
AP3S1Q92572 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S1Q92572 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S1Q92572 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S1Q92572 CICP23-201ENST00000605013 2741 ntBASIC14.4□□□□□ -0.1
AP3S1Q92572 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S1Q92572 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S1Q92572 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
AP3S1Q92572 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S1Q92572 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S1Q92572 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S1Q92572 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.4□□□□□ -0.1
AP3S1Q92572 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.4□□□□□ -0.1
AP3S1Q92572 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC14.4□□□□□ -0.1
AP3S1Q92572 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S1Q92572 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.4□□□□□ -0.1
AP3S1Q92572 AC098590.1-201ENST00000468126 897 ntBASIC14.4□□□□□ -0.1
AP3S1Q92572 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
AP3S1Q92572 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S1Q92572 AC010947.1-201ENST00000623454 693 ntBASIC14.4□□□□□ -0.1
AP3S1Q92572 CLN6-221ENST00000637494 765 ntTSL 5 BASIC14.4□□□□□ -0.1
AP3S1Q92572 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.4□□□□□ -0.1
AP3S1Q92572 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
AP3S1Q92572 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.4□□□□□ -0.1
AP3S1Q92572 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S1Q92572 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S1Q92572 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.4□□□□□ -0.1
AP3S1Q92572 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms