Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 AC046158.3-201ENST00000624947 2558 ntBASIC17.35■□□□□ 0.37
SHC3Q92529 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.34■□□□□ 0.37
SHC3Q92529 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC3Q92529 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC3Q92529 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC3Q92529 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC3Q92529 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SHC3Q92529 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
SHC3Q92529 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC3Q92529 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.34■□□□□ 0.37
SHC3Q92529 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC3Q92529 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC3Q92529 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC3Q92529 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.34■□□□□ 0.37
SHC3Q92529 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SHC3Q92529 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.34■□□□□ 0.37
SHC3Q92529 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.34■□□□□ 0.37
SHC3Q92529 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.34■□□□□ 0.37
SHC3Q92529 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC3Q92529 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.34■□□□□ 0.37
SHC3Q92529 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SHC3Q92529 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC3Q92529 DNAJB3-201ENST00000446806 729 ntBASIC17.34■□□□□ 0.37
SHC3Q92529 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.34■□□□□ 0.37
SHC3Q92529 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SHC3Q92529 AC069335.1-201ENST00000489972 472 ntBASIC17.34■□□□□ 0.37
SHC3Q92529 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC3Q92529 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.34■□□□□ 0.37
SHC3Q92529 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.34■□□□□ 0.37
SHC3Q92529 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.34■□□□□ 0.37
SHC3Q92529 AP001282.1-201ENST00000531301 1499 ntBASIC17.34■□□□□ 0.37
SHC3Q92529 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.34■□□□□ 0.37
SHC3Q92529 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.34■□□□□ 0.37
SHC3Q92529 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.34■□□□□ 0.37
SHC3Q92529 AC005829.1-201ENST00000570002 483 ntBASIC17.34■□□□□ 0.37
SHC3Q92529 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SHC3Q92529 AC024267.1-201ENST00000582320 895 ntBASIC17.34■□□□□ 0.37
SHC3Q92529 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.34■□□□□ 0.37
SHC3Q92529 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.34■□□□□ 0.37
SHC3Q92529 AC011477.6-201ENST00000604980 1927 ntBASIC17.34■□□□□ 0.37
SHC3Q92529 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.34■□□□□ 0.37
SHC3Q92529 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
SHC3Q92529 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC3Q92529 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC3Q92529 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SHC3Q92529 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC3Q92529 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.34■□□□□ 0.37
SHC3Q92529 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SHC3Q92529 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC3Q92529 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.34■□□□□ 0.37
SHC3Q92529 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHC3Q92529 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SHC3Q92529 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHC3Q92529 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.33■□□□□ 0.37
SHC3Q92529 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHC3Q92529 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.37
SHC3Q92529 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SHC3Q92529 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SHC3Q92529 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
SHC3Q92529 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
SHC3Q92529 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SHC3Q92529 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.33■□□□□ 0.36
SHC3Q92529 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.33■□□□□ 0.36
SHC3Q92529 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SHC3Q92529 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHC3Q92529 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.33■□□□□ 0.36
SHC3Q92529 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHC3Q92529 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.33■□□□□ 0.36
SHC3Q92529 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.33■□□□□ 0.36
SHC3Q92529 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.33■□□□□ 0.36
SHC3Q92529 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.33■□□□□ 0.36
SHC3Q92529 AC105339.1-204ENST00000636249 355 ntBASIC17.33■□□□□ 0.36
SHC3Q92529 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHC3Q92529 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SHC3Q92529 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHC3Q92529 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.33■□□□□ 0.36
SHC3Q92529 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHC3Q92529 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
SHC3Q92529 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SHC3Q92529 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHC3Q92529 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
SHC3Q92529 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.33■□□□□ 0.36
SHC3Q92529 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SHC3Q92529 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.33■□□□□ 0.36
SHC3Q92529 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SHC3Q92529 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SHC3Q92529 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SHC3Q92529 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SHC3Q92529 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SHC3Q92529 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHC3Q92529 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHC3Q92529 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHC3Q92529 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SHC3Q92529 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.32■□□□□ 0.36
SHC3Q92529 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.32■□□□□ 0.36
SHC3Q92529 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
SHC3Q92529 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.32■□□□□ 0.36
SHC3Q92529 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SHC3Q92529 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.32■□□□□ 0.36
SHC3Q92529 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms