Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 MIR1199-201ENST00000621445 119 ntBASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 ZNF259P1-201ENST00000407656 1365 ntBASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 AC112504.1-201ENST00000623415 1841 ntBASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 CDC14C-201ENST00000428251 1719 ntBASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40AQ8WXH6 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 LINC02447-202ENST00000501888 2146 ntBASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 AC106730.1-201ENST00000566722 1090 ntBASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 PGM5P2-202ENST00000637225 1043 ntBASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RAB40AQ8WXH6 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.4□□□□□ -0.11
RAB40AQ8WXH6 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 AC013268.4-201ENST00000637413 2228 ntBASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 PMS2P1-201ENST00000431037 1228 ntBASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 AC098831.1-202ENST00000438821 336 ntBASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 IGHV3-22-201ENST00000520721 359 ntBASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 SLC25A1P1-201ENST00000528351 927 ntBASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms