Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHD5Q8TDI0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHD5Q8TDI0 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHD5Q8TDI0 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHD5Q8TDI0 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CHD5Q8TDI0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHD5Q8TDI0 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHD5Q8TDI0 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHD5Q8TDI0 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.31■□□□□ 0.2
CHD5Q8TDI0 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHD5Q8TDI0 MIR943-201ENST00000401286 94 ntBASIC16.31■□□□□ 0.2
CHD5Q8TDI0 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.31■□□□□ 0.2
CHD5Q8TDI0 FAM207CP-201ENST00000443486 507 ntBASIC16.31■□□□□ 0.2
CHD5Q8TDI0 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.31■□□□□ 0.2
CHD5Q8TDI0 PHKG1P2-201ENST00000457537 863 ntBASIC16.31■□□□□ 0.2
CHD5Q8TDI0 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CHD5Q8TDI0 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.31■□□□□ 0.2
CHD5Q8TDI0 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHD5Q8TDI0 AC025048.3-201ENST00000590609 569 ntBASIC16.31■□□□□ 0.2
CHD5Q8TDI0 AC005702.4-201ENST00000618393 416 ntBASIC16.31■□□□□ 0.2
CHD5Q8TDI0 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHD5Q8TDI0 AC087499.5-201ENST00000452760 1342 ntBASIC16.31■□□□□ 0.2
CHD5Q8TDI0 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHD5Q8TDI0 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.31■□□□□ 0.2
CHD5Q8TDI0 BTBD7P1-201ENST00000447253 1453 ntBASIC16.31■□□□□ 0.2
CHD5Q8TDI0 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHD5Q8TDI0 LINC02199-201ENST00000506655 2702 ntBASIC16.31■□□□□ 0.2
CHD5Q8TDI0 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
CHD5Q8TDI0 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CHD5Q8TDI0 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHD5Q8TDI0 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHD5Q8TDI0 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.3■□□□□ 0.2
CHD5Q8TDI0 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHD5Q8TDI0 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHD5Q8TDI0 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
CHD5Q8TDI0 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHD5Q8TDI0 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHD5Q8TDI0 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHD5Q8TDI0 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CHD5Q8TDI0 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHD5Q8TDI0 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHD5Q8TDI0 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHD5Q8TDI0 TOMM22P5-201ENST00000416399 439 ntBASIC16.3■□□□□ 0.2
CHD5Q8TDI0 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.3■□□□□ 0.2
CHD5Q8TDI0 BCRP1-201ENST00000444246 691 ntBASIC16.3■□□□□ 0.2
CHD5Q8TDI0 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.3■□□□□ 0.2
CHD5Q8TDI0 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.3■□□□□ 0.2
CHD5Q8TDI0 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.3■□□□□ 0.2
CHD5Q8TDI0 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.3■□□□□ 0.2
CHD5Q8TDI0 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.3■□□□□ 0.2
CHD5Q8TDI0 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.3■□□□□ 0.2
CHD5Q8TDI0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.3■□□□□ 0.2
CHD5Q8TDI0 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHD5Q8TDI0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CHD5Q8TDI0 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHD5Q8TDI0 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHD5Q8TDI0 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHD5Q8TDI0 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHD5Q8TDI0 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CHD5Q8TDI0 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.29■□□□□ 0.2
CHD5Q8TDI0 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHD5Q8TDI0 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.29■□□□□ 0.2
CHD5Q8TDI0 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.29■□□□□ 0.2
CHD5Q8TDI0 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.29■□□□□ 0.2
CHD5Q8TDI0 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHD5Q8TDI0 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHD5Q8TDI0 AL450472.2-201ENST00000603663 1156 ntBASIC16.29■□□□□ 0.2
CHD5Q8TDI0 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.29■□□□□ 0.2
CHD5Q8TDI0 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.29■□□□□ 0.2
CHD5Q8TDI0 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHD5Q8TDI0 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CHD5Q8TDI0 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CHD5Q8TDI0 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHD5Q8TDI0 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CHD5Q8TDI0 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHD5Q8TDI0 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHD5Q8TDI0 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.29■□□□□ 0.2
CHD5Q8TDI0 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.29■□□□□ 0.2
CHD5Q8TDI0 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHD5Q8TDI0 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.29■□□□□ 0.2
CHD5Q8TDI0 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CHD5Q8TDI0 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.29■□□□□ 0.2
CHD5Q8TDI0 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.29■□□□□ 0.2
CHD5Q8TDI0 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.29■□□□□ 0.2
CHD5Q8TDI0 AL109936.8-201ENST00000641772 604 ntBASIC16.29■□□□□ 0.2
CHD5Q8TDI0 REXO1L1P-202ENST00000608646 1974 ntBASIC16.29■□□□□ 0.2
CHD5Q8TDI0 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.29■□□□□ 0.2
CHD5Q8TDI0 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
CHD5Q8TDI0 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHD5Q8TDI0 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHD5Q8TDI0 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHD5Q8TDI0 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHD5Q8TDI0 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHD5Q8TDI0 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHD5Q8TDI0 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHD5Q8TDI0 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHD5Q8TDI0 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.28■□□□□ 0.2
CHD5Q8TDI0 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHD5Q8TDI0 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CHD5Q8TDI0 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms