Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
SHKBP1Q8TBC3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SHKBP1Q8TBC3 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
SHKBP1Q8TBC3 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SHKBP1Q8TBC3 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SHKBP1Q8TBC3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.08■□□□□ 0.33
SHKBP1Q8TBC3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SHKBP1Q8TBC3 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
SHKBP1Q8TBC3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SHKBP1Q8TBC3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SHKBP1Q8TBC3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SHKBP1Q8TBC3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
SHKBP1Q8TBC3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SHKBP1Q8TBC3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SHKBP1Q8TBC3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SHKBP1Q8TBC3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.08■□□□□ 0.33
SHKBP1Q8TBC3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SHKBP1Q8TBC3 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SHKBP1Q8TBC3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SHKBP1Q8TBC3 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SHKBP1Q8TBC3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.08■□□□□ 0.33
SHKBP1Q8TBC3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SHKBP1Q8TBC3 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.08■□□□□ 0.32
SHKBP1Q8TBC3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SHKBP1Q8TBC3 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHKBP1Q8TBC3 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHKBP1Q8TBC3 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.08■□□□□ 0.32
SHKBP1Q8TBC3 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SHKBP1Q8TBC3 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SHKBP1Q8TBC3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.08■□□□□ 0.32
SHKBP1Q8TBC3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SHKBP1Q8TBC3 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SHKBP1Q8TBC3 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHKBP1Q8TBC3 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.08■□□□□ 0.32
SHKBP1Q8TBC3 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.08■□□□□ 0.32
SHKBP1Q8TBC3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SHKBP1Q8TBC3 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.08■□□□□ 0.32
SHKBP1Q8TBC3 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.08■□□□□ 0.32
SHKBP1Q8TBC3 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.08■□□□□ 0.32
SHKBP1Q8TBC3 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHKBP1Q8TBC3 AC020765.3-201ENST00000613051 740 ntBASIC17.08■□□□□ 0.32
SHKBP1Q8TBC3 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SHKBP1Q8TBC3 AC004840.1-201ENST00000636359 365 ntBASIC17.08■□□□□ 0.32
SHKBP1Q8TBC3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHKBP1Q8TBC3 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHKBP1Q8TBC3 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHKBP1Q8TBC3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.08■□□□□ 0.32
SHKBP1Q8TBC3 AL031731.1-201ENST00000642131 2094 ntBASIC17.08■□□□□ 0.32
SHKBP1Q8TBC3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHKBP1Q8TBC3 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SHKBP1Q8TBC3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.07■□□□□ 0.32
SHKBP1Q8TBC3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.07■□□□□ 0.32
SHKBP1Q8TBC3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.07■□□□□ 0.32
SHKBP1Q8TBC3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHKBP1Q8TBC3 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.07■□□□□ 0.32
SHKBP1Q8TBC3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHKBP1Q8TBC3 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SHKBP1Q8TBC3 AL589702.1-201ENST00000641229 1509 ntBASIC17.07■□□□□ 0.32
SHKBP1Q8TBC3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHKBP1Q8TBC3 RNF216P1-203ENST00000404404 2427 ntBASIC17.07■□□□□ 0.32
SHKBP1Q8TBC3 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
SHKBP1Q8TBC3 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.07■□□□□ 0.32
SHKBP1Q8TBC3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SHKBP1Q8TBC3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHKBP1Q8TBC3 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHKBP1Q8TBC3 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHKBP1Q8TBC3 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.07■□□□□ 0.32
SHKBP1Q8TBC3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.07■□□□□ 0.32
SHKBP1Q8TBC3 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.07■□□□□ 0.32
SHKBP1Q8TBC3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.07■□□□□ 0.32
SHKBP1Q8TBC3 AL596325.1-201ENST00000563991 1082 ntBASIC17.07■□□□□ 0.32
SHKBP1Q8TBC3 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.07■□□□□ 0.32
SHKBP1Q8TBC3 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.07■□□□□ 0.32
SHKBP1Q8TBC3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.07■□□□□ 0.32
SHKBP1Q8TBC3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.07■□□□□ 0.32
SHKBP1Q8TBC3 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.07■□□□□ 0.32
SHKBP1Q8TBC3 AL358472.5-202ENST00000641448 1267 ntBASIC17.07■□□□□ 0.32
SHKBP1Q8TBC3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHKBP1Q8TBC3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms