Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CFAP43Q8NDM7 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 ACTG1P3-201ENST00000431775 1114 ntBASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 NME4-207ENST00000450036 985 ntTSL 3 BASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 GNRHR2-203ENST00000581100 1187 ntBASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 AC106872.11-201ENST00000605838 421 ntBASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 LOX-206ENST00000639739 1626 ntTSL 5 BASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 KRT8P22-201ENST00000562317 1415 ntBASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 AGER-203ENST00000375065 665 ntTSL 2 BASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 CALR4P-201ENST00000431943 946 ntBASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 KRT90P-201ENST00000549264 1064 ntBASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 AC243562.2-201ENST00000561247 970 ntBASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC25.01■■□□□ 1.59
CFAP43Q8NDM7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CFAP43Q8NDM7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC25■■□□□ 1.59
CFAP43Q8NDM7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CFAP43Q8NDM7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CFAP43Q8NDM7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC25■■□□□ 1.59
CFAP43Q8NDM7 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC25■■□□□ 1.59
CFAP43Q8NDM7 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC25■■□□□ 1.59
CFAP43Q8NDM7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
CFAP43Q8NDM7 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC25■■□□□ 1.59
CFAP43Q8NDM7 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC25■■□□□ 1.59
CFAP43Q8NDM7 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC25■■□□□ 1.59
CFAP43Q8NDM7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CFAP43Q8NDM7 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC25■■□□□ 1.59
CFAP43Q8NDM7 FAM86HP-204ENST00000513466 959 ntBASIC25■■□□□ 1.59
CFAP43Q8NDM7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
CFAP43Q8NDM7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CFAP43Q8NDM7 AP001282.1-201ENST00000531301 1499 ntBASIC25■■□□□ 1.59
CFAP43Q8NDM7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC25■■□□□ 1.59
CFAP43Q8NDM7 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC25■■□□□ 1.59
CFAP43Q8NDM7 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC25■■□□□ 1.59
CFAP43Q8NDM7 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CFAP43Q8NDM7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CFAP43Q8NDM7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
CFAP43Q8NDM7 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CFAP43Q8NDM7 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
CFAP43Q8NDM7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
CFAP43Q8NDM7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC24.99■■□□□ 1.59
CFAP43Q8NDM7 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CFAP43Q8NDM7 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CFAP43Q8NDM7 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CFAP43Q8NDM7 AC074338.1-201ENST00000416825 156 ntBASIC24.99■■□□□ 1.59
CFAP43Q8NDM7 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC24.99■■□□□ 1.59
CFAP43Q8NDM7 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC24.99■■□□□ 1.59
CFAP43Q8NDM7 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC24.99■■□□□ 1.59
CFAP43Q8NDM7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CFAP43Q8NDM7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC24.99■■□□□ 1.59
CFAP43Q8NDM7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
CFAP43Q8NDM7 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
CFAP43Q8NDM7 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC24.99■■□□□ 1.59
CFAP43Q8NDM7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CFAP43Q8NDM7 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC24.99■■□□□ 1.59
CFAP43Q8NDM7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CFAP43Q8NDM7 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
CFAP43Q8NDM7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC24.98■■□□□ 1.59
CFAP43Q8NDM7 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
CFAP43Q8NDM7 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CFAP43Q8NDM7 RN7SL560P-201ENST00000577943 264 ntBASIC24.98■■□□□ 1.59
CFAP43Q8NDM7 AL021578.1-201ENST00000613646 709 ntBASIC24.98■■□□□ 1.59
CFAP43Q8NDM7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC24.98■■□□□ 1.59
CFAP43Q8NDM7 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
CFAP43Q8NDM7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC24.98■■□□□ 1.59
CFAP43Q8NDM7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
CFAP43Q8NDM7 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
CFAP43Q8NDM7 AC009053.2-201ENST00000563701 2365 ntBASIC24.98■■□□□ 1.59
CFAP43Q8NDM7 TPO-206ENST00000382269 1155 ntTSL 5 BASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms