Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC38A9Q8NBW4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC38A9Q8NBW4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC38A9Q8NBW4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC38A9Q8NBW4 AC009053.2-201ENST00000563701 2365 ntBASIC15.3■□□□□ 0.04
SLC38A9Q8NBW4 AC104794.3-201ENST00000566840 1248 ntBASIC15.3■□□□□ 0.04
SLC38A9Q8NBW4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC38A9Q8NBW4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC38A9Q8NBW4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC38A9Q8NBW4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC38A9Q8NBW4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC38A9Q8NBW4 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC38A9Q8NBW4 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC38A9Q8NBW4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC38A9Q8NBW4 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 ALOX12P2-203ENST00000570921 1945 ntBASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 GAPDHP21-201ENST00000450301 1010 ntBASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 API5-211ENST00000534695 560 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 AL596325.1-201ENST00000563991 1082 ntBASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 AL132655.2-201ENST00000596276 594 ntBASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC38A9Q8NBW4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SLC38A9Q8NBW4 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC38A9Q8NBW4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC38A9Q8NBW4 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC38A9Q8NBW4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC38A9Q8NBW4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC38A9Q8NBW4 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC38A9Q8NBW4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC38A9Q8NBW4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC38A9Q8NBW4 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC38A9Q8NBW4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.28■□□□□ 0.04
SLC38A9Q8NBW4 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC38A9Q8NBW4 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SLC38A9Q8NBW4 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC38A9Q8NBW4 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SLC38A9Q8NBW4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC38A9Q8NBW4 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC38A9Q8NBW4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC38A9Q8NBW4 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC38A9Q8NBW4 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC38A9Q8NBW4 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.28■□□□□ 0.04
SLC38A9Q8NBW4 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.28■□□□□ 0.04
SLC38A9Q8NBW4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.28■□□□□ 0.04
SLC38A9Q8NBW4 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC38A9Q8NBW4 AL365330.1-201ENST00000607459 531 ntBASIC15.28■□□□□ 0.04
SLC38A9Q8NBW4 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC38A9Q8NBW4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.28■□□□□ 0.04
SLC38A9Q8NBW4 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC38A9Q8NBW4 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.28■□□□□ 0.04
SLC38A9Q8NBW4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.28■□□□□ 0.04
SLC38A9Q8NBW4 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC38A9Q8NBW4 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC38A9Q8NBW4 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SLC38A9Q8NBW4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC38A9Q8NBW4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC38A9Q8NBW4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC38A9Q8NBW4 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC38A9Q8NBW4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms