Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CCDC170Q8IYT3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CCDC170Q8IYT3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC170Q8IYT3 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC170Q8IYT3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CCDC170Q8IYT3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC170Q8IYT3 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CCDC170Q8IYT3 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC170Q8IYT3 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC170Q8IYT3 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC170Q8IYT3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC170Q8IYT3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC170Q8IYT3 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC170Q8IYT3 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
CCDC170Q8IYT3 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC170Q8IYT3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCDC170Q8IYT3 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC170Q8IYT3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC170Q8IYT3 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC170Q8IYT3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC170Q8IYT3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC170Q8IYT3 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
CCDC170Q8IYT3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.53■□□□□ 0.4
CCDC170Q8IYT3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC170Q8IYT3 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC170Q8IYT3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC170Q8IYT3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC170Q8IYT3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC170Q8IYT3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC170Q8IYT3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.53■□□□□ 0.4
CCDC170Q8IYT3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.53■□□□□ 0.4
CCDC170Q8IYT3 OR7E14P-202ENST00000530490 1290 ntBASIC17.53■□□□□ 0.4
CCDC170Q8IYT3 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC170Q8IYT3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC170Q8IYT3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC170Q8IYT3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC170Q8IYT3 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC170Q8IYT3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC170Q8IYT3 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC170Q8IYT3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC170Q8IYT3 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC170Q8IYT3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC170Q8IYT3 AC136621.1-201ENST00000624017 2304 ntBASIC17.53■□□□□ 0.4
CCDC170Q8IYT3 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC170Q8IYT3 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC170Q8IYT3 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC170Q8IYT3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.52■□□□□ 0.4
CCDC170Q8IYT3 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC170Q8IYT3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC170Q8IYT3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC170Q8IYT3 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC170Q8IYT3 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC170Q8IYT3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC170Q8IYT3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC170Q8IYT3 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC170Q8IYT3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC170Q8IYT3 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC170Q8IYT3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC170Q8IYT3 AKR1C7P-201ENST00000305623 895 ntBASIC17.52■□□□□ 0.4
CCDC170Q8IYT3 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CCDC170Q8IYT3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
CCDC170Q8IYT3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC170Q8IYT3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC170Q8IYT3 MRPL20P1-201ENST00000400819 433 ntBASIC17.52■□□□□ 0.4
CCDC170Q8IYT3 FAM185BP-201ENST00000443595 716 ntBASIC17.52■□□□□ 0.4
CCDC170Q8IYT3 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.52■□□□□ 0.4
CCDC170Q8IYT3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.52■□□□□ 0.4
CCDC170Q8IYT3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC170Q8IYT3 OR7E47P-204ENST00000575924 449 ntBASIC17.52■□□□□ 0.4
CCDC170Q8IYT3 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.52■□□□□ 0.4
CCDC170Q8IYT3 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC170Q8IYT3 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC170Q8IYT3 ACTL9-202ENST00000612068 1252 ntBASIC17.52■□□□□ 0.4
CCDC170Q8IYT3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC170Q8IYT3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC170Q8IYT3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC170Q8IYT3 AC011477.6-201ENST00000604980 1927 ntBASIC17.52■□□□□ 0.4
CCDC170Q8IYT3 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC170Q8IYT3 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC170Q8IYT3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC170Q8IYT3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.52■□□□□ 0.39
CCDC170Q8IYT3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.52■□□□□ 0.39
CCDC170Q8IYT3 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC170Q8IYT3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC170Q8IYT3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CCDC170Q8IYT3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC170Q8IYT3 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC170Q8IYT3 AC006486.2-201ENST00000624246 2199 ntBASIC17.52■□□□□ 0.39
CCDC170Q8IYT3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
CCDC170Q8IYT3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC170Q8IYT3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC170Q8IYT3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CCDC170Q8IYT3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC170Q8IYT3 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC170Q8IYT3 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC170Q8IYT3 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC170Q8IYT3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC170Q8IYT3 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC170Q8IYT3 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC170Q8IYT3 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms