Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEFF1Q8IYR6 AL645728.1-201ENST00000366221 2101 ntBASIC16.12■□□□□ 0.17
TMEFF1Q8IYR6 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 AC092552.1-201ENST00000547243 906 ntBASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 MIR6775-201ENST00000617557 69 ntBASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 AL139011.1-202ENST00000642063 584 ntBASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEFF1Q8IYR6 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 AC119751.2-201ENST00000504529 210 ntBASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 TIMM17BP1-201ENST00000545713 516 ntBASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 COX11-210ENST00000639671 696 ntBASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 AL033527.4-201ENST00000641026 673 ntBASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 AL033527.5-201ENST00000641382 801 ntBASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 AL031731.1-201ENST00000642131 2094 ntBASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 CLK3P2-201ENST00000427566 1453 ntBASIC16.1■□□□□ 0.17
TMEFF1Q8IYR6 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms