Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.64■□□□□ 0.09
RAB43Q86YS6 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RAB43Q86YS6 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB43Q86YS6 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RAB43Q86YS6 AL136379.1-201ENST00000623471 2642 ntBASIC15.64■□□□□ 0.09
RAB43Q86YS6 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.64■□□□□ 0.09
RAB43Q86YS6 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB43Q86YS6 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAB43Q86YS6 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB43Q86YS6 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RAB43Q86YS6 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB43Q86YS6 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAB43Q86YS6 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAB43Q86YS6 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB43Q86YS6 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAB43Q86YS6 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAB43Q86YS6 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.64■□□□□ 0.09
RAB43Q86YS6 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.64■□□□□ 0.09
RAB43Q86YS6 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RAB43Q86YS6 AC022188.1-201ENST00000620960 1664 ntBASIC15.63■□□□□ 0.09
RAB43Q86YS6 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAB43Q86YS6 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.63■□□□□ 0.09
RAB43Q86YS6 AC007950.2-201ENST00000615045 2347 ntBASIC15.63■□□□□ 0.09
RAB43Q86YS6 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAB43Q86YS6 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAB43Q86YS6 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
RAB43Q86YS6 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB43Q86YS6 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB43Q86YS6 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB43Q86YS6 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RAB43Q86YS6 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
RAB43Q86YS6 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.63■□□□□ 0.09
RAB43Q86YS6 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB43Q86YS6 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
RAB43Q86YS6 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB43Q86YS6 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
RAB43Q86YS6 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB43Q86YS6 AC132872.4-202ENST00000622924 2756 ntBASIC15.63■□□□□ 0.09
RAB43Q86YS6 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB43Q86YS6 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.63■□□□□ 0.09
RAB43Q86YS6 SLC25A1P3-201ENST00000395415 828 ntBASIC15.63■□□□□ 0.09
RAB43Q86YS6 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.63■□□□□ 0.09
RAB43Q86YS6 AC107890.1-201ENST00000422478 521 ntBASIC15.63■□□□□ 0.09
RAB43Q86YS6 BASP1P1-201ENST00000430708 665 ntBASIC15.63■□□□□ 0.09
RAB43Q86YS6 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.63■□□□□ 0.09
RAB43Q86YS6 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.63■□□□□ 0.09
RAB43Q86YS6 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.63■□□□□ 0.09
RAB43Q86YS6 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.63■□□□□ 0.09
RAB43Q86YS6 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.63■□□□□ 0.09
RAB43Q86YS6 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.63■□□□□ 0.09
RAB43Q86YS6 LINC01225-203ENST00000563550 1244 ntBASIC15.63■□□□□ 0.09
RAB43Q86YS6 AC027307.2-201ENST00000591252 911 ntBASIC15.63■□□□□ 0.09
RAB43Q86YS6 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB43Q86YS6 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAB43Q86YS6 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAB43Q86YS6 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB43Q86YS6 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAB43Q86YS6 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAB43Q86YS6 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB43Q86YS6 FRMD8P1-201ENST00000440433 1524 ntBASIC15.63■□□□□ 0.09
RAB43Q86YS6 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAB43Q86YS6 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
RAB43Q86YS6 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB43Q86YS6 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.63■□□□□ 0.09
RAB43Q86YS6 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB43Q86YS6 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.63■□□□□ 0.09
RAB43Q86YS6 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB43Q86YS6 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RAB43Q86YS6 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB43Q86YS6 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RAB43Q86YS6 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB43Q86YS6 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB43Q86YS6 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RAB43Q86YS6 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.62■□□□□ 0.09
RAB43Q86YS6 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RAB43Q86YS6 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.62■□□□□ 0.09
RAB43Q86YS6 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RAB43Q86YS6 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
RAB43Q86YS6 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB43Q86YS6 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.62■□□□□ 0.09
RAB43Q86YS6 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.62■□□□□ 0.09
RAB43Q86YS6 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.62■□□□□ 0.09
RAB43Q86YS6 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.62■□□□□ 0.09
RAB43Q86YS6 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB43Q86YS6 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB43Q86YS6 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB43Q86YS6 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.62■□□□□ 0.09
RAB43Q86YS6 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RAB43Q86YS6 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
RAB43Q86YS6 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB43Q86YS6 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
RAB43Q86YS6 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.62■□□□□ 0.09
RAB43Q86YS6 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB43Q86YS6 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.62■□□□□ 0.09
RAB43Q86YS6 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RAB43Q86YS6 GPS2P2-201ENST00000430745 888 ntBASIC15.62■□□□□ 0.09
RAB43Q86YS6 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.62■□□□□ 0.09
RAB43Q86YS6 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.62■□□□□ 0.09
RAB43Q86YS6 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.62■□□□□ 0.09
RAB43Q86YS6 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms