Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHD1LQ86WJ1 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHD1LQ86WJ1 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC20.11■□□□□ 0.81
CHD1LQ86WJ1 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHD1LQ86WJ1 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHD1LQ86WJ1 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
CHD1LQ86WJ1 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHD1LQ86WJ1 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CHD1LQ86WJ1 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC20.1■□□□□ 0.81
CHD1LQ86WJ1 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC20.1■□□□□ 0.81
CHD1LQ86WJ1 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC20.1■□□□□ 0.81
CHD1LQ86WJ1 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHD1LQ86WJ1 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHD1LQ86WJ1 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC20.1■□□□□ 0.81
CHD1LQ86WJ1 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.1■□□□□ 0.81
CHD1LQ86WJ1 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CHD1LQ86WJ1 RARRES2P8-201ENST00000566335 367 ntBASIC20.1■□□□□ 0.81
CHD1LQ86WJ1 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHD1LQ86WJ1 AC073389.1-201ENST00000595595 795 ntBASIC20.1■□□□□ 0.81
CHD1LQ86WJ1 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHD1LQ86WJ1 FOXO1B-201ENST00000504678 1527 ntBASIC20.1■□□□□ 0.81
CHD1LQ86WJ1 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHD1LQ86WJ1 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
CHD1LQ86WJ1 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHD1LQ86WJ1 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHD1LQ86WJ1 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC20.1■□□□□ 0.81
CHD1LQ86WJ1 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC20.1■□□□□ 0.81
CHD1LQ86WJ1 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHD1LQ86WJ1 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHD1LQ86WJ1 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHD1LQ86WJ1 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
CHD1LQ86WJ1 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CHD1LQ86WJ1 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC20.09■□□□□ 0.81
CHD1LQ86WJ1 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHD1LQ86WJ1 AC092384.3-202ENST00000564646 2873 ntBASIC20.09■□□□□ 0.81
CHD1LQ86WJ1 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CHD1LQ86WJ1 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHD1LQ86WJ1 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC20.09■□□□□ 0.81
CHD1LQ86WJ1 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHD1LQ86WJ1 BSG-215ENST00000618006 1329 ntTSL 2 BASIC20.09■□□□□ 0.81
CHD1LQ86WJ1 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHD1LQ86WJ1 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC20.09■□□□□ 0.81
CHD1LQ86WJ1 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
CHD1LQ86WJ1 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHD1LQ86WJ1 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CHD1LQ86WJ1 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CHD1LQ86WJ1 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.09■□□□□ 0.81
CHD1LQ86WJ1 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHD1LQ86WJ1 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC20.09■□□□□ 0.81
CHD1LQ86WJ1 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC20.09■□□□□ 0.81
CHD1LQ86WJ1 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.09■□□□□ 0.81
CHD1LQ86WJ1 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC20.09■□□□□ 0.81
CHD1LQ86WJ1 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.09■□□□□ 0.81
CHD1LQ86WJ1 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.09■□□□□ 0.81
CHD1LQ86WJ1 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.09■□□□□ 0.81
CHD1LQ86WJ1 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC20.09■□□□□ 0.81
CHD1LQ86WJ1 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC20.09■□□□□ 0.81
CHD1LQ86WJ1 GOLGA2P9-201ENST00000596977 1937 ntBASIC20.09■□□□□ 0.81
CHD1LQ86WJ1 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHD1LQ86WJ1 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHD1LQ86WJ1 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHD1LQ86WJ1 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC20.09■□□□□ 0.81
CHD1LQ86WJ1 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHD1LQ86WJ1 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHD1LQ86WJ1 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC20.08■□□□□ 0.81
CHD1LQ86WJ1 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHD1LQ86WJ1 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
CHD1LQ86WJ1 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CHD1LQ86WJ1 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHD1LQ86WJ1 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHD1LQ86WJ1 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CHD1LQ86WJ1 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHD1LQ86WJ1 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CHD1LQ86WJ1 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHD1LQ86WJ1 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CHD1LQ86WJ1 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CHD1LQ86WJ1 AC023274.1-201ENST00000418278 595 ntBASIC20.08■□□□□ 0.81
CHD1LQ86WJ1 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CHD1LQ86WJ1 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CHD1LQ86WJ1 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC20.08■□□□□ 0.81
CHD1LQ86WJ1 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CHD1LQ86WJ1 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CHD1LQ86WJ1 INO80E-210ENST00000567705 880 ntTSL 3 BASIC20.08■□□□□ 0.81
CHD1LQ86WJ1 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC20.08■□□□□ 0.81
CHD1LQ86WJ1 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CHD1LQ86WJ1 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC20.08■□□□□ 0.81
CHD1LQ86WJ1 AC091812.2-201ENST00000619081 385 ntBASIC20.08■□□□□ 0.81
CHD1LQ86WJ1 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
CHD1LQ86WJ1 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHD1LQ86WJ1 AP003680.1-201ENST00000598970 3660 ntBASIC20.08■□□□□ 0.8
CHD1LQ86WJ1 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CHD1LQ86WJ1 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHD1LQ86WJ1 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC20.08■□□□□ 0.8
CHD1LQ86WJ1 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC20.08■□□□□ 0.8
CHD1LQ86WJ1 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
CHD1LQ86WJ1 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CHD1LQ86WJ1 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CHD1LQ86WJ1 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CHD1LQ86WJ1 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD1LQ86WJ1 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms