Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
LRRTM4Q86VH4 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRTM4Q86VH4 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRRTM4Q86VH4 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRRTM4Q86VH4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRRTM4Q86VH4 TREML5P-201ENST00000421694 576 ntBASIC15.96■□□□□ 0.15
LRRTM4Q86VH4 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.96■□□□□ 0.15
LRRTM4Q86VH4 MTND6P24-201ENST00000440466 518 ntBASIC15.96■□□□□ 0.15
LRRTM4Q86VH4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRTM4Q86VH4 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
LRRTM4Q86VH4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRTM4Q86VH4 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.96■□□□□ 0.15
LRRTM4Q86VH4 AL158211.3-201ENST00000607385 239 ntBASIC15.96■□□□□ 0.15
LRRTM4Q86VH4 RN7SL828P-201ENST00000607615 303 ntBASIC15.96■□□□□ 0.15
LRRTM4Q86VH4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.96■□□□□ 0.15
LRRTM4Q86VH4 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRTM4Q86VH4 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRRTM4Q86VH4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
LRRTM4Q86VH4 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRTM4Q86VH4 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRTM4Q86VH4 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRTM4Q86VH4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.96■□□□□ 0.15
LRRTM4Q86VH4 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.96■□□□□ 0.14
LRRTM4Q86VH4 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.96■□□□□ 0.14
LRRTM4Q86VH4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
LRRTM4Q86VH4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.96■□□□□ 0.14
LRRTM4Q86VH4 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
LRRTM4Q86VH4 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.96■□□□□ 0.14
LRRTM4Q86VH4 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 MIR770-201ENST00000390219 98 ntBASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 AC245100.5-201ENST00000452108 331 ntBASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 IGHV3-42-201ENST00000520410 361 ntBASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 BANF1P1-201ENST00000553684 263 ntBASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 FO538757.1-201ENST00000623083 1397 ntBASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRRTM4Q86VH4 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 AC055876.3-201ENST00000431496 288 ntBASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 AL139010.1-201ENST00000454878 894 ntBASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms