Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
FOXR1Q6PIV2 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.08■□□□□ 0.32
FOXR1Q6PIV2 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXR1Q6PIV2 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
FOXR1Q6PIV2 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.08■□□□□ 0.32
FOXR1Q6PIV2 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.08■□□□□ 0.32
FOXR1Q6PIV2 AC112698.1-201ENST00000510299 916 ntBASIC17.08■□□□□ 0.32
FOXR1Q6PIV2 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.08■□□□□ 0.32
FOXR1Q6PIV2 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXR1Q6PIV2 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
FOXR1Q6PIV2 AC105339.3-201ENST00000560043 636 ntBASIC17.08■□□□□ 0.32
FOXR1Q6PIV2 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.08■□□□□ 0.32
FOXR1Q6PIV2 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.08■□□□□ 0.32
FOXR1Q6PIV2 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
FOXR1Q6PIV2 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.08■□□□□ 0.32
FOXR1Q6PIV2 AC008735.5-201ENST00000623544 497 ntBASIC17.08■□□□□ 0.32
FOXR1Q6PIV2 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXR1Q6PIV2 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
FOXR1Q6PIV2 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
FOXR1Q6PIV2 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
FOXR1Q6PIV2 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.08■□□□□ 0.32
FOXR1Q6PIV2 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXR1Q6PIV2 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXR1Q6PIV2 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
FOXR1Q6PIV2 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC17.08■□□□□ 0.32
FOXR1Q6PIV2 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
FOXR1Q6PIV2 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
FOXR1Q6PIV2 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXR1Q6PIV2 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXR1Q6PIV2 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.32
FOXR1Q6PIV2 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FOXR1Q6PIV2 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
FOXR1Q6PIV2 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FOXR1Q6PIV2 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
FOXR1Q6PIV2 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FOXR1Q6PIV2 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
FOXR1Q6PIV2 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXR1Q6PIV2 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXR1Q6PIV2 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC17.07■□□□□ 0.32
FOXR1Q6PIV2 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FOXR1Q6PIV2 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.07■□□□□ 0.32
FOXR1Q6PIV2 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.07■□□□□ 0.32
FOXR1Q6PIV2 KRT18P65-201ENST00000439811 1286 ntBASIC17.07■□□□□ 0.32
FOXR1Q6PIV2 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.07■□□□□ 0.32
FOXR1Q6PIV2 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.07■□□□□ 0.32
FOXR1Q6PIV2 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FOXR1Q6PIV2 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.07■□□□□ 0.32
FOXR1Q6PIV2 BX005266.1-201ENST00000473402 457 ntBASIC17.07■□□□□ 0.32
FOXR1Q6PIV2 RNA5SP416-201ENST00000516838 111 ntBASIC17.07■□□□□ 0.32
FOXR1Q6PIV2 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.07■□□□□ 0.32
FOXR1Q6PIV2 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
FOXR1Q6PIV2 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
FOXR1Q6PIV2 AL139288.1-201ENST00000623748 933 ntBASIC17.07■□□□□ 0.32
FOXR1Q6PIV2 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXR1Q6PIV2 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXR1Q6PIV2 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXR1Q6PIV2 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.07■□□□□ 0.32
FOXR1Q6PIV2 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FOXR1Q6PIV2 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXR1Q6PIV2 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXR1Q6PIV2 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXR1Q6PIV2 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.07■□□□□ 0.32
FOXR1Q6PIV2 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXR1Q6PIV2 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 UNC93B6-202ENST00000528242 690 ntBASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 AC006486.2-201ENST00000624246 2199 ntBASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms